| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01707 |
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| Symbol | trmD |
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| ID | 6775867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 1832982 |
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| End bp | 1833743 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642755140 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_002126005 |
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| Protein GI | 196156516 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0225322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACACCGG AAAAGTGGTT CGGCGTTGTT AGCCTGTTTC CAGATATGTT TGCCCCATTC
ACTCAGCAGG GTGTAATAGG GCGAGCTGTA AAGTCTGGAA CCGTAATGGT TGACACGTTT
AACCCCCGTG ACTTTACTCA TGACCGCCAT CGCACAGTTG ACGACCGCCC CTACGGAGGC
GGCCCCGGCA TGTTGATGAT GGTAAAACCG CTTACCGACG CAATACAGGC TGCCAAGAAA
GTTGGCGGCG AAAACAGTAA GGTGATCTAC TTATCACCCC AAGGGAAACC CCTTGATCAG
GCTGGCGTTC AGCGCCTAGC CAGTATCGAC CGCACAATTT TAATTTGTGG TCGATATGAA
GGTATCGACG AGCGAGTAAT CGAAAGCCAT GTAGATGAAG AAGTCTCTAT TGGTGATTAC
GTGCTAAGCG GCGGTGAATT ACCTGCAATG GTTCTTATGG ACGCAGTTGC ACGGTTAGTT
CCTGGCGTGT TGGGGCATAA AGCTTCAGCG GTTGAAGATT CTTTCACTGA CGGTCTTTTG
GATTGTCCGC ACTATACGCG GCCCGAAATA CTCGATGGTC AAAAGGTGCC CGAGGTGTTG
TTAAGTGGTG ATCATGAAAA AATTAGGCAG TGGCGATTGA TGCAGTCTTT AGGTAGAACC
TTGCAGCGTC GCCCTGATTT GTTAAATCAC CTAGCTCTGA CTGAGGAGCA ACAACGTTTG
CTTGATCAAT ATCAAGCACT GTTGCGGCAA GATGACAGTT AA
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| Protein sequence | MTPEKWFGVV SLFPDMFAPF TQQGVIGRAV KSGTVMVDTF NPRDFTHDRH RTVDDRPYGG
GPGMLMMVKP LTDAIQAAKK VGGENSKVIY LSPQGKPLDQ AGVQRLASID RTILICGRYE
GIDERVIESH VDEEVSIGDY VLSGGELPAM VLMDAVARLV PGVLGHKASA VEDSFTDGLL
DCPHYTRPEI LDGQKVPEVL LSGDHEKIRQ WRLMQSLGRT LQRRPDLLNH LALTEEQQRL
LDQYQALLRQ DDS
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