| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01699 |
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| Symbol | |
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| ID | 6776297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 1824751 |
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| End bp | 1827867 |
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| Gene Length | 3117 bp |
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| Protein Length | 1038 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642755132 |
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| Product | RND family efflux transporter |
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| Protein accession | YP_002125997 |
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| Protein GI | 196156508 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGATT CAAACCTATC TTCTTCGGTA AGTGATTTAC CCTCTCTGTC GATACGACGT
CCGGTTCTTA TCGTTGTACT TAACTTGCTT ATTGCTATTG CCGGGCTTGC CGCACTAAGT
GGCCTAGAAG TTCGTGAACT TCCTGATGTA GACACCCCGC GAGTAACGGT AACTGCGCAA
TTTCCTGGCG CGTCACCGGA AACCGTCGAC GCCGAGGTAA CCGGGCGCCT AGAAGGTGCT
GTTGCGCGAG TAAGCGGTGT TAAGAACATA TACGCACAAA GTGAAGAAAA CTCTGCCCGA
GTAAGGGTTG AATTTCGACC TGGCGTGAAT TTAGAAGATG CGGCGAACGA GGTTCGCGAA
TCGGTTAGCC GTGTTCAACG CCAGCTTCCC GAAGACGTTG AACAAGTAGC GATTATTCGC
GCTGACAGTG ACGCACAAGC GGTGGTAAGT TTGGCCATAT CTAGCGATAC GTTAGATATG
GAGACCCTAA CCGAACGTGT TGATACCGAT GTCGCGCCTT TGTTTTTAAG TATTCCAGGT
GTTGCCGACG TAACGCTAAA TGGTGACCGA GAGCGCGTTT TACGTGTATC TGTTGACCCT
CTTCGTTTAA CCAGTTTTGG TTTGTCGATG AGTGATATTG GCGATGCTCT CGCCCTTGCG
CCATTTGATG TTCCTGCAGG TAGTATTCAA TCGGCCGAGC AAGCCTTAAT TGTGCGGGCC
GATGCCACCT CCGTATCTGC TGAAGATGTA GGTAATATTG TTGTCACCGG TGATATACGT
ATTAACGATG TGGCCAGTGT TTACTTTGGC CCAGCGGACA CCACCAGCGT AGTCCGTTTG
GACGGTACGC CTGTTATTGG TGTAGGCGTA ATACGCCAGG CCAGTTCAAA TACTATTGAA
ATATCAGATG AAGTGTTGGC AATGGTCGAA GACCTTGATA AACGCTTTGC GGATATGAAT
ATTGTGGTTA CCGCTGACGA TGCTGAATTC ATTCGAGATT CAGTTAAAGA AGTGGTCGTA
TCCCTTAGCC TGACCATAGC TCTTGTGGTG GTTACCCTTC TTGTATTTAT TGGCTCATGG
CGTGCAACCA TTGTCCCAGC GCTTTCTATT CCCGTATCGC TTGCCGGTGC ACTTGCTATT
ATTTGGGGAA TGGGTTTTTC CATAAATATA CTCACTTTGC TCGCTTTGGT GCTTGCCACC
GGAATGATAG TTGACGACGC CATTGTCGTT TCTGAAAACA TTCAGCGCCG CAGAAGCATG
GGACTAGGTG CGCGCGCTGC AGCCGTAGTA GGCACTCGAG AAGTCTTCTT TGCTGTGGTT
GCCACCACAG CCGTACTTGC CTCTGTATTT ATTCCTATTG CGTTTTTGCC TTCGACCGCA
GGGCGTTTGT TTAGAGAATT TGGTGGCGTA TTAGCGGGTG CAGTGGTTAT CTCCTCTTTT
GTAGCGTTGT CTCTTGTACC TGCATTAACG GCCCGTTTGA AGGTAAAACA AACCAGTAAA
ACCGGCCTAT TTAGCAAAAC GTTCGGCCGT TTTGGCCACG CGTGTTTAAG GGTTTACCAA
GCGTCGCTAC TCAAAGCGCT TAAATATGGC TGGGTTGTGG GCATATTGAG CTTAGCCGCC
GGCGGCGGTG CCTACATTCT GGCGCAAAAC ATCGATAATG AGCTATTGCC AAGCGAAGAC
AGGGGCACCA TACGCATATT TGCCCGTGGG CCTGACGGCG CAGGACTTAA CTTTATGGAC
AGACAAGCAG AGAAAATGGA AGAGCTGCTG CTGCCTTATG TAGAAAACGG CACCATCGAC
TCGATTTATA CGGTCGTTGG ATCATGGGAT CCTAATATCG TCTTTATCAC GGCACCGCTC
AAACATTGGG ATGAACGAGA CACGTCGCTG CAAGACGTCG TTAACGAGAT TCGTCCTAAA
CTACAGCAAA TTCCTGGCGC GCCGGGCAAC GCATTTGGCG GTAACAGCCT TAACCTTCGC
GGGCAAGGTG GAGGTCTTGA AATCGCCCTT ACCGGTGACA CGTACGAGAA TATATTTAAG
GCTGCACAGC GCTTTTCCCG GCAATTAGAA GACACCCTGC CTGAGCTTGG CAGGCCTCGT
ATTAGTTACG ACCCTACCCA GCCTCAAATG CGGGTAAACA TCGACAGACG CCGCGCCGAA
GAACTCGGCG TCCCGCTTAC CGATATTGCC AGCACACTCC GGGCTGCGGT CAACGGCGAT
GACATTGCCG ACTTGAACGT AGGCGATCAA GCCATTCCTA TTATGTTGCA GACCAATAAT
CGCAGCACGC TTGACCCGTC AGAACTTACG AGCCTTTATG TGAAAAGTAC TGACGGTAAT
TTGGTACCGC TTTCTAGCGT GGCTTATATA ACTGAAGAAG GGGTAGCAGC AGAGCTTGAG
CGTCAAGCGC AACGCCGCGC AATAAAAGTA GAAATGGAAT TACCAGAGGA CGTGGCACTT
AGTGAAGTGG TGCAACAAAT TCGCACGCTT GCCCTCGATA CACTACCTGA TGGTATTGGC
CTTGTATTTT TAGGCGAAGC GCAAACTTTT GAAGAAACAT CCAAACAAGT CGCGCTAACT
TACGTACTGG CTTTTATCAT TGTGTTATTA GTACTCGCAG CGCAGTTTGA AAGTGTTAAC
AGCGCTGTTG TGGTCATGCT CACCGTACCT TTCGGTATTG CTGCCGCGGT CTACGCATTA
TTTTTAACGG GTACGAGTAT TAATATTTAT TCTCAGATTG GGTTGGTGAT GTTAATTGGT
CTTTTGGCCA AAAACGCCAT TCTTTTAATA GAATTTGCTG ACCAATTGCG CGATAAGGGC
TTTGATATTT ATGACGCCAT TGTTGAAGCG GGTAAAGTGC GACTTCGCCC CATTATGATG
ACACTTGTTT CGACTATACT CGGTGGCCTG CCGCTTATAT TGTCAACGGG AGCAGGCGCT
GAAGCCCGTA ATGCTATAGG TTGGGTGGTC TTTGGCGGCT TGGGGATTGC CGTTGTGTTT
ACCCTTTATC TCACGCCGGT ACTTTATTTA GCGTTAGCGC GATTCACAAA ACCCAGAGCT
GATGAAAGCG CTAAGCTAGA AAAAGAAATG GAAGATGCTC AAGCACAGCA TTCCTAA
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| Protein sequence | MSDSNLSSSV SDLPSLSIRR PVLIVVLNLL IAIAGLAALS GLEVRELPDV DTPRVTVTAQ
FPGASPETVD AEVTGRLEGA VARVSGVKNI YAQSEENSAR VRVEFRPGVN LEDAANEVRE
SVSRVQRQLP EDVEQVAIIR ADSDAQAVVS LAISSDTLDM ETLTERVDTD VAPLFLSIPG
VADVTLNGDR ERVLRVSVDP LRLTSFGLSM SDIGDALALA PFDVPAGSIQ SAEQALIVRA
DATSVSAEDV GNIVVTGDIR INDVASVYFG PADTTSVVRL DGTPVIGVGV IRQASSNTIE
ISDEVLAMVE DLDKRFADMN IVVTADDAEF IRDSVKEVVV SLSLTIALVV VTLLVFIGSW
RATIVPALSI PVSLAGALAI IWGMGFSINI LTLLALVLAT GMIVDDAIVV SENIQRRRSM
GLGARAAAVV GTREVFFAVV ATTAVLASVF IPIAFLPSTA GRLFREFGGV LAGAVVISSF
VALSLVPALT ARLKVKQTSK TGLFSKTFGR FGHACLRVYQ ASLLKALKYG WVVGILSLAA
GGGAYILAQN IDNELLPSED RGTIRIFARG PDGAGLNFMD RQAEKMEELL LPYVENGTID
SIYTVVGSWD PNIVFITAPL KHWDERDTSL QDVVNEIRPK LQQIPGAPGN AFGGNSLNLR
GQGGGLEIAL TGDTYENIFK AAQRFSRQLE DTLPELGRPR ISYDPTQPQM RVNIDRRRAE
ELGVPLTDIA STLRAAVNGD DIADLNVGDQ AIPIMLQTNN RSTLDPSELT SLYVKSTDGN
LVPLSSVAYI TEEGVAAELE RQAQRRAIKV EMELPEDVAL SEVVQQIRTL ALDTLPDGIG
LVFLGEAQTF EETSKQVALT YVLAFIIVLL VLAAQFESVN SAVVVMLTVP FGIAAAVYAL
FLTGTSINIY SQIGLVMLIG LLAKNAILLI EFADQLRDKG FDIYDAIVEA GKVRLRPIMM
TLVSTILGGL PLILSTGAGA EARNAIGWVV FGGLGIAVVF TLYLTPVLYL ALARFTKPRA
DESAKLEKEM EDAQAQHS
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