| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01675 |
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| Symbol | |
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| ID | 6775192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 1795005 |
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| End bp | 1796519 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 642755107 |
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| Product | proline/sodium symporter |
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| Protein accession | YP_002125973 |
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| Protein GI | 196156484 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.068924 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAATGG AAAGTTACCT GTCACTAGCA GTATATTTTA TCGCAATGCT AGGGATAGGG
TTGTTTGCTT ACCGACAATC TACCAGTGAT ATTTCTGGTT ACATCTTAGG AGGGCGACAA
GTAAGCCCTC AAGTTACCGC GCTATCAGCG GGTGCATCTG ACATGTCAGG TTGGATGTTA
ATGGGCCTTC CTGGCGCAAT GTATTTAACC GGTTTCGATG CCGTATACAT TGCAATAGGG
TTAGTAGCGG GTGCATTAGC CAATTATCTT TTAGTCGCGC CTAAACTTCG TGTTTATACC
GAAGTAGCTG ACGACTCGTT AACCGTGCCT GAGTTTTTTG CAAAACGCTT TAATACGCCC
AATGCGAGCT TACGCATTGT GTCTGCGGTA ATTATTGTAC TGTTTTTTAC ATTGTACACG
TCAGCAGGAC TTGTAGCGGG CGGGAAGCTT TTTGAAAGTG CATTTTCAGT AGACTATCAA
CTTGGCTTGT TTATCACGCT GGGTGTGGTG GTGTCTTACA CATTGCTAGG CGGTTTCCTA
GCGGTAAGTC TTACTGACTT CGTACAAGGC TGTATCATGT TCGTTGCACT GGTACTGGTG
CCAATCGTTG CTTTTACTGA ATTCGATAGT GTTTCGCAGA TGACAAGTGC AGCTTATCAA
TCTGTACCGG ATTTTTCAGC GTCTCTTGAA ACACTGACCA TCGTAGGTTT GTTATCAAGT
TTAGGGTGGG GCTTAGGTTA TTTCGGTCAG CCACACATTA TTGTTCGCTT TATGGCTATT
CGTTCTGTTA ACGCTATTAG CACTGCGCGC AACATTGGCA TGTCGTGGAT GACAGTGACA
ATCATAGGCG CTTTAGCGAC CGGGTTTGTC GGTATTGCTT ATGCCAATCA GTTTGGCTTA
GCGGTAGACG ACCCTGAAAC AATTTTTATT ATTTTTTCTC AATTGCTGTT TCATCCACTT
ATTAGTGGTT TTTTGATGGC CGCTATTTTG GCAGCGATTA TGAGTACAAT TTCGTCACAG
TTACTTGTTA GTGCGAGTTC ATTGACGGAA GACATTTATC GCGTATTGGT GAATAAAAAA
TCACCACAAA AAACACTTAG CGAAAAGCAA ACGGTAACAA TCGGGCGTTA TGGTGTAGCG
GGGGTTGCAG TTGTTGCGCT ACTGCTAGCT ATGGACGCGT CAAATACAAT TTTATCTTTA
GTAAGTAACG CTTGGGCCGG TTTTGGTGCT GCATTTGGTC CATTAGTCCT GTTTTGTCTG
TATAAAAAGG ACCTAACAGC GAAAGCGGCC ATGGCAGGTA TGGTGAGCGG TGCGGTAACC
GTGCTGTTTT GGATTTATGC CCCGGTTTTA GCTGACGGTA AAACGTTAAG CAGCGTTATT
TATGAAATTA TTCCAGGGTT TGCGGTAAGT ACGTTAACAC TTTATGGGGT AAGCTGTTTC
GGCGAGAACC CATCGAAAAA CGTACAGGCA ACGTTTGCGC AAGCCAGTGA AGAATTAGCG
AATCAACAAT CTTAA
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| Protein sequence | MPMESYLSLA VYFIAMLGIG LFAYRQSTSD ISGYILGGRQ VSPQVTALSA GASDMSGWML
MGLPGAMYLT GFDAVYIAIG LVAGALANYL LVAPKLRVYT EVADDSLTVP EFFAKRFNTP
NASLRIVSAV IIVLFFTLYT SAGLVAGGKL FESAFSVDYQ LGLFITLGVV VSYTLLGGFL
AVSLTDFVQG CIMFVALVLV PIVAFTEFDS VSQMTSAAYQ SVPDFSASLE TLTIVGLLSS
LGWGLGYFGQ PHIIVRFMAI RSVNAISTAR NIGMSWMTVT IIGALATGFV GIAYANQFGL
AVDDPETIFI IFSQLLFHPL ISGFLMAAIL AAIMSTISSQ LLVSASSLTE DIYRVLVNKK
SPQKTLSEKQ TVTIGRYGVA GVAVVALLLA MDASNTILSL VSNAWAGFGA AFGPLVLFCL
YKKDLTAKAA MAGMVSGAVT VLFWIYAPVL ADGKTLSSVI YEIIPGFAVS TLTLYGVSCF
GENPSKNVQA TFAQASEELA NQQS
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