Gene MADE_01658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01658 
Symbol 
ID6778546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand- 
Start bp1778843 
End bp1779313 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content49% 
IMG OID642755090 
ProductrRNA large subunit methyltransferase 
Protein accessionYP_002125956 
Protein GI196156467 
COG category[S] Function unknown 
COG ID[COG1576] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.000106355 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTATAC AAATTGTTGC GGTTGGTACG AAAATGCCAA ACTGGGTGAA TACAGGCGTT 
GACGAATTCA TTCGCCGCTT CCCCAGCGAC ATGCCCGTTT CATTTACCGA GATTGCTGCC 
GGAAAGCGCG GAAAAAACGC CGATATAAAA CGTATTTTAG AAAAAGAAGG CGAGCAGATG 
CTTGCTGCTA TTCCTAAAGG AAACCGCATT GTTACTTTAG AAGTAACGGG CAAACCTTGG 
GACACGCCAA CCCTAGCCAA GCAGTTGGAT AACTGGAAAA TGGATGGGCG CGACGTGAGC 
TTACTTATCG GCGGTCCTGA AGGATTAGCC CCAGACTGTA TTGCCGCCTC TGAACAAAAA 
TGGTCATTGT CAGCGCTTAC GTTACCCCAC CCTCTGGTGA GAATTATTCT TACCGAAAGC 
CTCTACCGCG CGTGGTCGGT AACGCAGAAT CACCCTTATC ATCGTGAGTA A
 
Protein sequence
MRIQIVAVGT KMPNWVNTGV DEFIRRFPSD MPVSFTEIAA GKRGKNADIK RILEKEGEQM 
LAAIPKGNRI VTLEVTGKPW DTPTLAKQLD NWKMDGRDVS LLIGGPEGLA PDCIAASEQK 
WSLSALTLPH PLVRIILTES LYRAWSVTQN HPYHRE