Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01650 |
Symbol | |
ID | 6775291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 1772244 |
End bp | 1772915 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642755082 |
Product | Lipoate-protein ligase B |
Protein accession | YP_002125948 |
Protein GI | 196156459 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0321] Lipoate-protein ligase B |
TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00106577 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGACC AGCCGATTCA GCCTGAAGCG AATGGTGTTG TAGTACGCCA ACTAGGCCGT CAGCCATATG AGCCTGTTTT CGAGGCAATG AAACGCTTTA CCGATGAGCG TGACCAGCAC ACCCAAGACG AGATTTGGCT AGTCGAGCAT GACGCTGTTT TTACCCAAGG ACAAGCGGGG AAAGCTGAGC ATATCCTTAT GCCCGGCGAT ATTCCCGTTG TGCAAGTAGA CCGTGGCGGC CAAGTCACCT ATCACGGCCC GGGCCAACAA GTCATTTATT TATTGCTTAA TATCAAGCGA AGAAAACTTG GCGTTCGTCA CCTCGTTACA GCGATGGAAG AATCTGTGGT CGGACTTCTC GCAAAGTACG GTGTAAAAGC CTATCCAAAG CCCGACGCGC CTGGCGTGTA CGTGGACGAA AAGAAAGTGT GCTCTCTTGG TTTAAGAATA CGTAATGGCT GCTCGTTTCA CGGGTTGGCT TTAAATGTTA GTATGGACCT ATCACCGTTT CAGCGTATTA ACCCATGTGG TTATGCCGGT ATGGAAATGA TAGATACCGC GCGCCTTAAC GGCCCAAATA CGCTTGAAAC CGCTGGTAAT GAATTAACGC ATTTGTTGCT AGAAGCGCTT TCCATTGCAC AGCCAATATA TAAAGAAGGT TTTGATGAGT AA
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Protein sequence | MSDQPIQPEA NGVVVRQLGR QPYEPVFEAM KRFTDERDQH TQDEIWLVEH DAVFTQGQAG KAEHILMPGD IPVVQVDRGG QVTYHGPGQQ VIYLLLNIKR RKLGVRHLVT AMEESVVGLL AKYGVKAYPK PDAPGVYVDE KKVCSLGLRI RNGCSFHGLA LNVSMDLSPF QRINPCGYAG MEMIDTARLN GPNTLETAGN ELTHLLLEAL SIAQPIYKEG FDE
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