| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01643 |
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| Symbol | |
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| ID | 6778675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 1765341 |
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| End bp | 1767206 |
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| Gene Length | 1866 bp |
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| Protein Length | 621 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642755075 |
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| Product | signal peptide peptidase SppA, 67K type |
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| Protein accession | YP_002125941 |
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| Protein GI | 196156452 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type
[TIGR00706] signal peptide peptidase SppA, 36K type
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.20854 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGCCA AAGGAAATTG GACCAAATCC TTGTTTATTG GCTTGTGGAC GGTGCTTAAC
TTCACCCGCA AACTTTTCTT TAATCTTATT TTCATTGTTA TTTTTGTTGG ATTGATTGTT
GCTATAGCTG GTCAGGACAA CGAGCAACTA ACGGTAAATA AAGGCAGTGC ACTTTTTCTA
ACGCTTAACG GCAAGTTGGT CATTGAAAAA GAAAGTGTTG ATCCCTTCGA GCAGTTTTTA
CAGGAATCGC TAGGCAGTGA ACCTGAAAAC CCAGAAGTAC TTGTTCGCGA CGTGGTAAAA
GTGCTAGAGA ACGCCCAAAA AGACCGTCGT ATTAAAGCTC TGGTGTTAGA TTTGCAAGGC
TTTACAGGCG GTGGTTTAGA TAAACTTCGC GCCGTAGCGA AAGCTATTGA CGGGTTTAAA
GAATCGGAAA AGCCGGTATA CGCTATTGGC GATTACTTCT CACAGGACCA GTATTACTTA
GCAGCCCATG CTGACAACAT TTATCTAAAC CCAATGGGAG GGTTGATGTT TGAAGGGTAT
GGTCGCTTCG GAATGTACTT TAAAGACATG CTGGAAAAGC TGAAGGTTAC CACACATATT
TTCCGTGTGG GCACCTATAA ATCAGCGGTT GAGCCACTCA TGCGCAACGA CATGTCACAG
GAAGCCAAAG AAGCAGAAAA GCAGTGGTTA GATGGCTATT GGGCTCAATA CAAGGCTGAC
GTTTCAGCAG CCCGCGGCAT TGATGAAGCT AATTTTGATG AAACCCTTGA AGAGCTTTTG
GCTAAGTTTG AAGCCGCCGG CGGCGACTTT GCTCAATATG CCCTGCAAAA CAATTGGGTA
GATGCGTTAA AAACACGAGA AGAAGTCAGG CTTGAACTTA TCGACATAGT GGGCGAAGAC
GACAATAAAC TCGGCGTGAA TTTAACGTCA TTTAATACCT ACCTTAAGGT GATTAATCCG
CCCATGCCGG CCATTGAATC TGATATGGAT AAAGTCGCTA TTGTTGTTGC CAAAGGAACG
ATTTTAGACG GCGATCAAAA AGCTGGCACT ATAGGCGGCG ACAGCACTGC ACGTCTGTTA
AGAAAAGCGC GATTAAATGA CAACGTAAAA GCAGTGGTAC TACAGATAGA CTCTCCTGGC
GGTAGTGCAT TTGCATCTGA GGTTATCCGT CAAGAAGTAC TCCAGCTTCA ACAGGCGGGC
AAGCCGGTTA TTGCATCAAT GAGCACTTAC GCGGCGTCTG GTGGTTATTG GATTGCGGCA
AGCGCAGATA AAATTATCGC AAGCCCGAGC ACAATAACGG GCTCTATCGG TGTATTTGGC
ATGTTTATGA CCTACGAAAA TTCACTGGAT TATTTAGGCA TTCATAGCGA TGGCGTCGCA
TCCACTGAGC TTGCTGGTTT TTCAACGGTT CGCCCGTTAG CACCAGAGTT TGGTCAGATT
CTTCAGCGCA ATGTGGAAAA CACCTATGGT AACTTTCTGT CGCTTGTCTC TAACGCACGA
GATATGCCAA TTGATGAAGT AGACAATGTA GCGCAAGGTC GCGTGTGGAT TGGTGACGAT
GCGATTAACT TGGGGCTAGT TGATGAATTA GGTACCCTTG ACGATGCGGT TGTTGCTGCA
GCCGAAATGG CTGAACTAGA AAATTACGAT ACGTTTTACG TAAAGCGTAC ATTAACCGCT
CAGGAAATAT TCTGGAAAGA ATTTTTTGGA CAAGCAATGA CATTTGTCGG CAAATGGCAG
TTTGCGAATG CAGATACTGC ACTGGTTAAC GAGTTTAAGC GTGTACTGAA AGAGTTTAAC
TTGGTAAACC AACTTAACGA TCCGAAAGGC ACTTATGTTC TTTGCTTACC CTGCGACGTT
GAATAA
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| Protein sequence | MAAKGNWTKS LFIGLWTVLN FTRKLFFNLI FIVIFVGLIV AIAGQDNEQL TVNKGSALFL
TLNGKLVIEK ESVDPFEQFL QESLGSEPEN PEVLVRDVVK VLENAQKDRR IKALVLDLQG
FTGGGLDKLR AVAKAIDGFK ESEKPVYAIG DYFSQDQYYL AAHADNIYLN PMGGLMFEGY
GRFGMYFKDM LEKLKVTTHI FRVGTYKSAV EPLMRNDMSQ EAKEAEKQWL DGYWAQYKAD
VSAARGIDEA NFDETLEELL AKFEAAGGDF AQYALQNNWV DALKTREEVR LELIDIVGED
DNKLGVNLTS FNTYLKVINP PMPAIESDMD KVAIVVAKGT ILDGDQKAGT IGGDSTARLL
RKARLNDNVK AVVLQIDSPG GSAFASEVIR QEVLQLQQAG KPVIASMSTY AASGGYWIAA
SADKIIASPS TITGSIGVFG MFMTYENSLD YLGIHSDGVA STELAGFSTV RPLAPEFGQI
LQRNVENTYG NFLSLVSNAR DMPIDEVDNV AQGRVWIGDD AINLGLVDEL GTLDDAVVAA
AEMAELENYD TFYVKRTLTA QEIFWKEFFG QAMTFVGKWQ FANADTALVN EFKRVLKEFN
LVNQLNDPKG TYVLCLPCDV E
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