| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01636 |
|---|
| Symbol | |
|---|
| ID | 6775173 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 1758708 |
|---|
| End bp | 1759913 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 642755068 |
|---|
| Product | N-acylglucosamine 2-epimerase |
|---|
| Protein accession | YP_002125934 |
|---|
| Protein GI | 196156445 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2942] N-acyl-D-glucosamine 2-epimerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.137096 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACGC AACCAAATTT TGCATCAAAC GATTTTCTGC ATGATCACAT CAAGAGCATT
TTGGCTTTTT ACGAGCCCAA TGTTGATGCC GTCTCAGGTG GCTTCCATCA AAATTTTATG
GACGATGGAA GCATATTTGA TGAGAAAACA CGTCACCTAG TTAGCTCTAC GCGTTTCGTT
TTTAACTACG CGAGAGCCTA TTTAGCTTAT GGCGATACTC GATACAAAGC CCGTGTTGAG
TCTGGCATTC AATTTTTGCG AGATTATCAT TTACAAGAAG ATACTGGCGG CTACGCTTGG
TTACTTGATG TAAACGGTAA GGCCTGTAAA GTCGTTGATG CCACTAATCA CTGCTACGGC
TTGGCCTTTG TTATTTTGGA TTACAGCTGG GCACTGCGAG CTGGCGTTAA AGAAGCTGAG
CTGTATATTC ATGATGCCTT CGAATTAATG GAAACCCATT TCTGGGATGC TGAGTACGGC
TTGTACAAAG ATGAGTTTAA CGCAGATTTT TCTCGCTGCA GTGATTACCG CGGTCAAAAT
GCCAATATGC ACAGCTGCGA AGCGCTTATT GCGGCGTTTG AGGCCACCGG TCACGGTCCG
TTTTTAGAAC GCGCCTTGCT GCTCGCTCAC AATATCACCG AGCGCCAAGC GGATAAAGCT
GACGGTCGAA TTTGGGAACA CTATACCAAA ACTTGGGAAG TTGATTGGGA ATACAATAAG
AATGATCCTA AAAACCTTTT TCGCCCTTGG GGATTCCAAC CAGGCCACCA TACTGAATGG
GCAAAACTAC TACTACAAAT TCATCAGTAT CAGCCACAGG ATTGGTTAGT CGCACGCGCC
CGCTCACTAT TTGACGCTGT CATTGATATT AGCTGGGATA ATGAAAACGG TGGCTTGTAT
TACGGTTTCG CACCGGATAG CCGTATCTGT GATGATGAAA AATACTTCTG GGTGCAGGCT
GAATCTTTTG CGTGCGCGGC GCGTTTAGCC CTAGAAACAG GGGAAGATAA ATACTGGCAG
TGGTACCACC GAATTTGGGA CTATGCATGG TCATATATGG TCGACCACAA ATATGGGGCA
TGGTTTAGGA TTTTATCAGC CAAAAATCAA AAGCTAGAGA CCACAAAAAG CCCTGTAGGC
AAAACCGATT ATCACACAAT GGGCGCATGT TATGACGTTC TCGATGCACT AAGCTTTTAT
AAATAA
|
|---|
| Protein sequence | MTTQPNFASN DFLHDHIKSI LAFYEPNVDA VSGGFHQNFM DDGSIFDEKT RHLVSSTRFV
FNYARAYLAY GDTRYKARVE SGIQFLRDYH LQEDTGGYAW LLDVNGKACK VVDATNHCYG
LAFVILDYSW ALRAGVKEAE LYIHDAFELM ETHFWDAEYG LYKDEFNADF SRCSDYRGQN
ANMHSCEALI AAFEATGHGP FLERALLLAH NITERQADKA DGRIWEHYTK TWEVDWEYNK
NDPKNLFRPW GFQPGHHTEW AKLLLQIHQY QPQDWLVARA RSLFDAVIDI SWDNENGGLY
YGFAPDSRIC DDEKYFWVQA ESFACAARLA LETGEDKYWQ WYHRIWDYAW SYMVDHKYGA
WFRILSAKNQ KLETTKSPVG KTDYHTMGAC YDVLDALSFY K
|
|---|
| |