| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01578 |
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| Symbol | valS |
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| ID | 6775207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 1690419 |
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| End bp | 1693193 |
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| Gene Length | 2775 bp |
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| Protein Length | 924 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642755010 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_002125876 |
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| Protein GI | 196156387 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.337374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAAA CCTTCGAACC GCAGTCCATC GAGCAGCAAT GCTACAAGTC ATGGGAAGAG
GCGGGTTTAT TTAAAGCTTC AGGTAGCGGC GACCCTTATT GTATTTTGCT TCCGCCACCA
AACGTTACCG GTAGCCTTCA CATGGGCCAT GGTTTCCAGC AAACCATTAT GGACGCCTTA
ACCCGTTATC ACCGCATGAA GGGCGACAAT ACGCTATGGC AAGTGGGTAC TGACCACGCC
GGTATTGCTA CCCAGATGGT GGTAGAACGC CAACTTAACG CTGAAGGCAA GACGCGCCAC
GATTTAGGTC GCGAAGACTT CATCAAGAAA GTGTGGGAAT GGAAAGAGCA CAGCGGCGGA
ACGATCACCG GTCAAATGCG CCGTTTAGGT ACGTCACCTG ACTGGTCTCG CGAAGTGTTC
ACCATGGACG AAGACCTGTC TAAAGCCGTA ACGGAAGTGT TCGTTAAACT ACACGAAGAA
GGCCTTATTT ACCGTGGCAA GCGTTTGGTT AACTGGGATC CAGTGCTTCA CACAGCAGTA
TCTGATCTTG AAGTACTAAA CGAAGAAGAA GACGGCCACA TGTGGCACAT GCGCTACCCG
TTAGCTGACG GTAGCGGTGA GCTAGTGGTA GCCACTACCC GCCCTGAAAC CATGCTAGGT
GATACAGCGG TTGCGGTTCA CCCCGATGAC GAGCGTTATC AACGCTTTAT CGGCAAAGAA
ATTAAGCTGC CGATTACTGG CCGTTTAATT CCTGTGATTG CCGATGACTA TGTCGACCAA
GAATTCGGTA CAGGCTGCGT TAAAATTACG CCAGCTCACG ACTTTAACGA CTACGACATG
GGTAAGCGTC ACAACCTACC TATGATCAAC ATTCTTACCG ACGATGCGAA AATTAACGAT
GATGCGCCAG AAGCGTATCG CGGTTTAGAT CGCTTCGATG CGCGTAAGCA AATTGTTGCT
GACCTAGAAG CCCAAGGCTC GTTGGTTAAG ATTGAGCCGC ACGAGCTTAA AGTGCCGCGT
GGCGACAGAA CCGGAGCGGT TATCGAGCCA TACCTTACTG ACCAGTGGTA TGTAGCCGTT
GAGTCTCTTG CTAAGCCAGC TATTGAAGCA GTGGAAAGCG GTGAAATTCG TTTTGTGCCA
GAGAACTGGA ACAAAACTTA TTACCAGTGG ATGCACAACA TTCAAGACTG GTGTATTTCA
CGTCAACTGT GGTGGGGACA CCGTATTCCG GCGTGGTATG ACGAAAACGG CAAGGTTTTT
GTTGGCCGCA CCGAAGAAGA AGTACGTGAA AAGCACGGCC TTGGCAGTGA GGTAACCCTT
TCACAAGACG ACGATGTACT CGATACCTGG TTCTCAAGTG CACTATGGCC GTTCGCGACC
ATGGGCTGGC CAGAAGAAAC GCCAGATCTA GAAACCTTCG TACCGTCTTC AGTGCTAGTA
ACTGGCTTTG ACATCATCTT CTTCTGGGTT GCCAGAATGA TCATGATGAC CAAGAAGTTC
ACCGGCAAAA TTCCGTTTAA AGATATCTAC ATCACTGGTC TTATTCGCGA TGAGAACGGC
GATAAAATGT CAAAGTCAAA GGGCAACGTG CTTGACCCCA TCGATTTGAT TGATGGTATT
GATATTGAGT CGCTAGTCAC TAAGCGTACC GCAGGCATGA TGCAGCCGCA GCTGGCTGAA
AAGATTGCCA AGCGCACGCG TAAGCAGTTC CCTGACGGTA TTCAGGCTTA CGGTACAGAC
GCACTTCGCT TTACCTTTGC TGCTATGGCG TCAACCAGCC GCGACATCAA CTTTGATATG
GCCCGTGTTG AAGGCTACCG CAACTTCTGT AACAAAATTT GGAATGCATC GCGTTTCGTA
TTGATGAACA CAGAAGAGCA CGACACAGGT CGTGACGGTG GCGAAATGGT ACTTAGCATG
GCCGATCGCT GGATTTGGGC GAAGTTCCAA CAAACCCTGG TTGAGTTTGA AAAGGCCCTT
GAAGACTACC GCTTCGACAT TGCTGCGCAA ACGGTTTACG AGTTCACCTG GAACCAGTTC
TGCGACTGGT ACTTAGAGCT GACTAAGCCT GTGCTTAGCA ACGATGCCAG CACCGACGCT
GAAAAGCGCG GTACACGCCA TACGCTTATC AATGTGCTTG AAAGCCTGCT TCGCTTGTTG
CACCCGCTAA TGCCATTTAT CACCGACACT ATTTGGCAGC GCGTTGTGCC ACAAAGTGCG
CTTAAGGTGG AAGAGGGCGC CAGCATTATG GTTCAGGCAT TCCCTGAGGT TGATGCAGCA
AAACAAGACG ACAAAGTACT TGCTGATATC GAGTGGGTGA AGAAGTTTAT CGTGGGTATT
CGTAATATCC GCGGTGAAAT GGACATTTCG CCAAACAAAC CGCTTAACGC GCTACTTAAA
AACGTAAGCG ATGAAGACGC GCGTCGTCTT GATGCGGCTA AAGCGTTCCT CGATAAGCTT
TCTAAGCTTG AAACCGTAAC TATATTGAAA GACGGTGAAG AAGCACCAGC CAGCGCCACA
GCGCTTGTGG GCGAGATGGA AATTCTTATC CCAATGGCAG GGCTTATCGA TAAAGACGCA
GAGCTTGCTC GTATTACTAA GGCCATGGAG AAAATCGAGA AAGATGTTTC TCGTACTCGT
GGCAAATTAG GTAACGAGAA GTTCGTAAGT AATGCACCAG AAGCGGTTAT TGAAAAAGAA
CGCGGTAAGT TAGAAGAGGG CGAAAAAGCC CTAGCCAAAC TTAAAGAGCA GTTCGACACC
ATAAAAGCGC TGTAA
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| Protein sequence | MDKTFEPQSI EQQCYKSWEE AGLFKASGSG DPYCILLPPP NVTGSLHMGH GFQQTIMDAL
TRYHRMKGDN TLWQVGTDHA GIATQMVVER QLNAEGKTRH DLGREDFIKK VWEWKEHSGG
TITGQMRRLG TSPDWSREVF TMDEDLSKAV TEVFVKLHEE GLIYRGKRLV NWDPVLHTAV
SDLEVLNEEE DGHMWHMRYP LADGSGELVV ATTRPETMLG DTAVAVHPDD ERYQRFIGKE
IKLPITGRLI PVIADDYVDQ EFGTGCVKIT PAHDFNDYDM GKRHNLPMIN ILTDDAKIND
DAPEAYRGLD RFDARKQIVA DLEAQGSLVK IEPHELKVPR GDRTGAVIEP YLTDQWYVAV
ESLAKPAIEA VESGEIRFVP ENWNKTYYQW MHNIQDWCIS RQLWWGHRIP AWYDENGKVF
VGRTEEEVRE KHGLGSEVTL SQDDDVLDTW FSSALWPFAT MGWPEETPDL ETFVPSSVLV
TGFDIIFFWV ARMIMMTKKF TGKIPFKDIY ITGLIRDENG DKMSKSKGNV LDPIDLIDGI
DIESLVTKRT AGMMQPQLAE KIAKRTRKQF PDGIQAYGTD ALRFTFAAMA STSRDINFDM
ARVEGYRNFC NKIWNASRFV LMNTEEHDTG RDGGEMVLSM ADRWIWAKFQ QTLVEFEKAL
EDYRFDIAAQ TVYEFTWNQF CDWYLELTKP VLSNDASTDA EKRGTRHTLI NVLESLLRLL
HPLMPFITDT IWQRVVPQSA LKVEEGASIM VQAFPEVDAA KQDDKVLADI EWVKKFIVGI
RNIRGEMDIS PNKPLNALLK NVSDEDARRL DAAKAFLDKL SKLETVTILK DGEEAPASAT
ALVGEMEILI PMAGLIDKDA ELARITKAME KIEKDVSRTR GKLGNEKFVS NAPEAVIEKE
RGKLEEGEKA LAKLKEQFDT IKAL
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