| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01571 |
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| Symbol | |
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| ID | 6775242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 1682363 |
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| End bp | 1682896 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642755003 |
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| Product | putative RNA polymerase sigma factor (ECF family) protein |
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| Protein accession | YP_002125869 |
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| Protein GI | 196156380 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACATG AAACTTTGTT CCCTCTGCTG TGTAAAACGG CAGACGGCGA CAAAAAAGCC
TTCGCAGAGC TTTATAAGAT AACCAGTCCG CAGCTTTATG CGGTTGCTTT AAAGCTGTTA
AAGCGACCCG AGCTTGCCGA TGAGGCCACA CAAGATGCCT ATATTAAAAT CTGGCATAAC
GCAGGAAATT ACCAGCGTGG AAAAGGCACA GTACTTACGT GGATGGTAAG CATTGCACGC
TATCGCGCAC TAGATTTAAT TCGCTATCAC AATGTGAGAA ACGAAGTTGA GCTTCACGAT
GACGCGCCAT CGGGCGTTGA AGCCACTCAA GCTGTTAAGC TAGGTGCTGA ACAAGCAAAA
TTAGCGACCT GTTTAGATGA ACTTGAGGGC CCCCAACGAC AAGCTATTCA CTTGGCTTAC
GTGAATGGCA TGTCGCATCA AGAAGTGGTG AATCACTTAG CATCACCACT TGGTACAATT
AAAAGCTGGA TAAGACGAGG CTTGCAAAGT TTGCAGAGGT GCCTATCACT ATGA
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| Protein sequence | MEHETLFPLL CKTADGDKKA FAELYKITSP QLYAVALKLL KRPELADEAT QDAYIKIWHN
AGNYQRGKGT VLTWMVSIAR YRALDLIRYH NVRNEVELHD DAPSGVEATQ AVKLGAEQAK
LATCLDELEG PQRQAIHLAY VNGMSHQEVV NHLASPLGTI KSWIRRGLQS LQRCLSL
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