| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01549 |
|---|
| Symbol | |
|---|
| ID | 6775152 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 1662355 |
|---|
| End bp | 1663347 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 642754980 |
|---|
| Product | cytochrome-c peroxidase |
|---|
| Protein accession | YP_002125847 |
|---|
| Protein GI | 196156358 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1858] Cytochrome c peroxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACGGAA AGCCGATAAA AAGTTGGCCA ACAGCAGAAA CCGCGGACGG CCAGCCCGCT
ATTGCCCTAG CTCCATTAAA ACCCAAAGCC CCTCTGGCCA CCTCCCAGCA AATTGCATTG
GGCGAAAGGT TATTCAACGA CCCGCTGTTA TCTCGTGATA ACAGCGTAAG TTGTGCTAGT
TGCCATTTTA GCGAGCGTCA CTTTCAAGAT GGCAGGCGAA GTGCCACTGG AGTTAGAAAG
CAAGTAGGTA AACGGAATAC GCCACCTATT TTTGGTATTG ATCACTGGGA AAGCTTTTTT
TGGGATGGGC GGGCCCAGAG CGCCACTGAG CAAGCGTTAA AGCCTATTGA AAACCCCATA
GAAATGGATT TACCTATTGC GGACGCATTA AAGCGATTAA ATGAATCTCC AATATACCCA
AGTTTGTTTA AAAACGCATA TGGAAGAGAA GATATAACAT CGCCTATGCT TGCAATGGCG
TTAGTGGCGT TTGAAAGAAC CATTCCACCG CCTAAAAGTA AATACCAGCA CTTCATTACT
TTGGCTGAAA CGTTGCCAGA GAAAGCGCAA AGCATGCTCT CTGACTCCGA ACTTCAAGGG
TTACATCTTT TCAGAACCAA AGCGCAATGC ATGACGTGCC ATGAAGGTGC GTTACTTAGT
GATAACGAGT TCCACGTTAC AGGGTTTCAT CTATATGGCA GGCGCTTTGA GGATTTAGGA
AGAAGCGAAT TTACCCAAGA TGTTAAGGAT ATCGGAAAAT TCAGAACACC TTCCTTACTT
GGTGTTTCCA ATACAGGGCC TTGGATGCAC AACGGGTTAT TCACACAGTT TCGCCCTATG
ATTGAGCAAT ATAATGCAGG CGGATTTAGA CCGAAGGCTA GAGGAAGTAA AGCCAGCGAT
CCTTTTTTCC CTGTAACAAC ACCACTTATC GAACCACTTA ACTTAACGGA AGAAGAAGTT
ACAGCATTAG TAGAGTTTTT AAATATTCTT TGA
|
|---|
| Protein sequence | MYGKPIKSWP TAETADGQPA IALAPLKPKA PLATSQQIAL GERLFNDPLL SRDNSVSCAS
CHFSERHFQD GRRSATGVRK QVGKRNTPPI FGIDHWESFF WDGRAQSATE QALKPIENPI
EMDLPIADAL KRLNESPIYP SLFKNAYGRE DITSPMLAMA LVAFERTIPP PKSKYQHFIT
LAETLPEKAQ SMLSDSELQG LHLFRTKAQC MTCHEGALLS DNEFHVTGFH LYGRRFEDLG
RSEFTQDVKD IGKFRTPSLL GVSNTGPWMH NGLFTQFRPM IEQYNAGGFR PKARGSKASD
PFFPVTTPLI EPLNLTEEEV TALVEFLNIL
|
|---|
| |