Gene MADE_01543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01543 
Symbol 
ID6775131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp1655282 
End bp1655701 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content44% 
IMG OID642754976 
Productprobable RTX (repeat in structural toxin) 
Protein accessionYP_002125843 
Protein GI196156354 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACTTA AGTTCGTTCA AAACAAAGAA AATAAAATAA GAATAAGTGG AAAACTGGCG 
TGTTTAGCTA CGTCCGTTTT AGCGTTGTCT GCATGCGGTG GCGGAAGTGG CGGTAATAGC
GCACCTAGCT TAAGCCAAGC TAGTCTATCC ATAACTACCC TTGAGGATAA TGCTGTAACA
GGAACTGTGG TGGCGTCCGA CTCAGACGGT GACACACTAG GCTATTCGGT TGGGGCAAGC
CAGACTAATG GAAGTTTGAC GGTAAACCAG GATGGAAGCT TTGTTTATAC GCCGAGTGCC
GACTTCTTTG GTGAAGATAC AGCAAGTATT ACAGTATCTG ACAGTATCGA AGCAGTAACT
GCAACACTTA CTTTTAGCGT TTCCAATGTA AACGATTTAC CTGTTATTCA AACCTCATAA
 
Protein sequence
MALKFVQNKE NKIRISGKLA CLATSVLALS ACGGGSGGNS APSLSQASLS ITTLEDNAVT 
GTVVASDSDG DTLGYSVGAS QTNGSLTVNQ DGSFVYTPSA DFFGEDTASI TVSDSIEAVT
ATLTFSVSNV NDLPVIQTS