Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01543 |
Symbol | |
ID | 6775131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 1655282 |
End bp | 1655701 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642754976 |
Product | probable RTX (repeat in structural toxin) |
Protein accession | YP_002125843 |
Protein GI | 196156354 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACTTA AGTTCGTTCA AAACAAAGAA AATAAAATAA GAATAAGTGG AAAACTGGCG TGTTTAGCTA CGTCCGTTTT AGCGTTGTCT GCATGCGGTG GCGGAAGTGG CGGTAATAGC GCACCTAGCT TAAGCCAAGC TAGTCTATCC ATAACTACCC TTGAGGATAA TGCTGTAACA GGAACTGTGG TGGCGTCCGA CTCAGACGGT GACACACTAG GCTATTCGGT TGGGGCAAGC CAGACTAATG GAAGTTTGAC GGTAAACCAG GATGGAAGCT TTGTTTATAC GCCGAGTGCC GACTTCTTTG GTGAAGATAC AGCAAGTATT ACAGTATCTG ACAGTATCGA AGCAGTAACT GCAACACTTA CTTTTAGCGT TTCCAATGTA AACGATTTAC CTGTTATTCA AACCTCATAA
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Protein sequence | MALKFVQNKE NKIRISGKLA CLATSVLALS ACGGGSGGNS APSLSQASLS ITTLEDNAVT GTVVASDSDG DTLGYSVGAS QTNGSLTVNQ DGSFVYTPSA DFFGEDTASI TVSDSIEAVT ATLTFSVSNV NDLPVIQTS
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