Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01526 |
Symbol | |
ID | 6775281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 1636100 |
End bp | 1638895 |
Gene Length | 2796 bp |
Protein Length | 931 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642754959 |
Product | glycosyl hydrolase, BNR repeat-containing protein |
Protein accession | YP_002125826 |
Protein GI | 196156337 |
COG category | [R] General function prediction only |
COG ID | [COG4447] Uncharacterized protein related to plant photosystem II stability/assembly factor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGGCTG CGCTTGCTAT TTGCGTAAGT GCACTTTCTA GTTTCTCGCA TTCTGCATTC GCACTTGAAG ATACGGTTAG CCCTGAACTT TTCGACAAAA TGGAGTATCG CTTCATTGGG CCTTATCGCG GCGGGCGCTC GGTGGCGGTC ACTGGGGTTG AAGGTAATAC CAACCTTTAT TTTATGGGTA CCGCTGGTGG CGGTGTGTGG AAAACCGAAA ACGCGGGTTT ATCGTGGAAA GCTATATCCG ATAAAACATT TAAAGTAGGC AGTATTGGTT CTATCGCGGT TGCGCCTTCA GACCCTAACG TTATTTACGT AGGTACTGGT GAAGGCCCTA TTCGAGGTGT AACCACAAGC CATGGAAAAG GTGTTTATAA ATCTACTGAC GGCGGTGAAA ACTGGAAGCT GATGGGGTTA GATAAACGGG GTCAAATCCC TAAAATTCGC ATACACCCCA CTAATCCTGA TATAGCTTGG GCGGCAGTGC AGGGCAATAT CTGGGGGCCG AATGAAGAGC GCGGTATATT CAAAACGACG GATGGCGGCG AAACATGGCA GCACGTATTA AAAGTGAATG CCGACACGGG CGCAGCTGAT TTGGCTATTG ACCCAACCAA CCCCAGAATT CTTTATGCGA GCATGTGGCA TCACGGCAGA ACGCCTTGGT TTATTAAATC AGGCGGCGAG GGCGGTGGCC TTTACAAATC AACAGACGGT GGTGAAAGCT GGGACAAGCT AGAAAAGGGC CTGCCTAAGC TTATTGGTAA AGTAGGTGTT GATATTGCTG CGTCTAACCC AAAGCGCCTC TACGCCATTA TCGAGGCTGA TGAAGGCGGT TTATATCGCA GTGATGATGC AGGTAAATCA TGGGAGCTAA TGAACGGCGA CAATATTCTT AAAGCTCGCG CGTGGTATTA CAACCACATT AAGGTTGACC CGGTAGATGA AAATACCCTG TATGTGATGA ATGTGCAGCT GCATAAATCC ATTGATGGCG GCAAAACCTT CGAAATTAAA TCTCTGCCCC ACGGTGACAC CCACGATATG TGGATAAACC CGGAAAACAG CTTAAACATG ATCAATGCTA ATGACGGTGG CGCAACGGTT ACCTTCGACG GTGGTGAATC GTGGTCAAGC ATTTACAACC AGCCAACGGC GCAGTTTTAT CGTGTAATCA CTGATAACTT AAACCCTTAC TATGTGTATG GCGGCCAGCA AGACAACTCA ACTATGGCAA CGCCGTCTGA AACCTGGGGT GACGGTATGG GTATAGAAGA TCAGTTTGCT GTTGGCGGTG GCGAAAGTGC GCATATTGCG TTTAACCCTG ACGATCCAAC GCTTATTTAC GCCACTACCA TTAATGGAAC ACTAACCGAA TACAACCGCG ATACCGGGCT TACACGTCCC ATCATGCCTT ACCCTGAGTA TGTGTTTGGA CGCAATGCGA GGGATCAAAA GTACCGCACG AATTGGAATG CGCCAGTGCT GGTTTCAAAG CACGACCCTA GCACGGTGTA TTACGGCACG CAGATGATTT TAAAAACCAC CGACCGCGGT GTAAATTGGC AAGAAATCAG CCCAGACTTA ACCCGTAACG AGCCTGAAAA ACAGGGGCTA AACGGCGGGC CGATTACCAA TGAACAAGCC GGGGCAGAAT ACTACAATAC GGTTTTCTAT ATTGCTGAGT CAGCGGTTAA CAAAGGCGAG CTTTGGGTTG GTGCTGATGA CGGTAAGCTT CATATTACGC GTGATGAAGG TAAAAACTGG AAAGATGTTA CGCCACATAA TAAAGAAGCG CAGGTTAATG CTATTGAGCT AAGCCCTCAT GCACAAGGCA GAGCTTACGT TGCGGTAGCA GGCTATAAGT TAAATGACTA CACACCTTAC ATCTACAAAA CCGATAATTA CGGCAAGCGC TGGAAGCGTA TTGACGAAGG GCTCCCTGAA GACGCTTTTG TACGTGTTGT GCGTGAAGAT ACAGAGCGTG AAGGGATGCT GTTCGCGGGT ACAGAAAGCG GCATGTTTAT TAGCTTCGAT GACGGCAAAC ACTGGCAAGA GCTAGATTTA AACCTTCCGC CGGTGTCGAT CACCGATATG CAGGTAAAGG GTGACGACCT GGTTGTTGCA ACGCAAGGGC GAGGCTTTTG GATTTTAGAT GACATTAGCC CCCTGCGCGA AGTGCATAAG TCCCTTGATG ATGAAGCGCT ATTTCAATTT GAACCGGTTG ATGGCGTTCG CTTGTTATCT GGCGGCGGCA TGACCGATCA GCCACAAGCG AAAAATCCAC CCCGTGGCGC GACTTTCCGC TATTACCTGA AAGATGCATT AGAAGAAGAC CAAACGCTAC GCATTGACAT ATTTAATGCA GATAACGAGC TGGTTCGCAC ACTGTCATCA GCACCGAGTG CATTTGAGAA ATGCGCAAAA GGTAACGAAG ACGTTCGCAG CCCTATCAAA TTTAAACACC CATCGACCAA AGCAGGGTAC AACACGTTCG TGTGGGACCT TCGCCGTGAG CCACTAAACT GCATTGAGAA TGTAAAACTG TTTGGCGGTT GGAAAGGTGC TCGCGTGATG CCGGGCGACT ACAAGGCGAA GATCACCGTG GGTGAACAGG CACAAACCCG TGCGTTTAAA GTGCTTCCAG ACCCAAGAGA AGAGGCCGAC AAAGCGCAGC TTCAAGTGGT TGAAAAGAGC ATTCAGGCAA CAGAAACCTT GTTAAACGAT TTGTTTGCAC ACTTGCAAAA AGCCCGTGAT GTGCGCGCGC AGTTGAGTGA TGTTATCGGA AGATAA
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Protein sequence | MVAALAICVS ALSSFSHSAF ALEDTVSPEL FDKMEYRFIG PYRGGRSVAV TGVEGNTNLY FMGTAGGGVW KTENAGLSWK AISDKTFKVG SIGSIAVAPS DPNVIYVGTG EGPIRGVTTS HGKGVYKSTD GGENWKLMGL DKRGQIPKIR IHPTNPDIAW AAVQGNIWGP NEERGIFKTT DGGETWQHVL KVNADTGAAD LAIDPTNPRI LYASMWHHGR TPWFIKSGGE GGGLYKSTDG GESWDKLEKG LPKLIGKVGV DIAASNPKRL YAIIEADEGG LYRSDDAGKS WELMNGDNIL KARAWYYNHI KVDPVDENTL YVMNVQLHKS IDGGKTFEIK SLPHGDTHDM WINPENSLNM INANDGGATV TFDGGESWSS IYNQPTAQFY RVITDNLNPY YVYGGQQDNS TMATPSETWG DGMGIEDQFA VGGGESAHIA FNPDDPTLIY ATTINGTLTE YNRDTGLTRP IMPYPEYVFG RNARDQKYRT NWNAPVLVSK HDPSTVYYGT QMILKTTDRG VNWQEISPDL TRNEPEKQGL NGGPITNEQA GAEYYNTVFY IAESAVNKGE LWVGADDGKL HITRDEGKNW KDVTPHNKEA QVNAIELSPH AQGRAYVAVA GYKLNDYTPY IYKTDNYGKR WKRIDEGLPE DAFVRVVRED TEREGMLFAG TESGMFISFD DGKHWQELDL NLPPVSITDM QVKGDDLVVA TQGRGFWILD DISPLREVHK SLDDEALFQF EPVDGVRLLS GGGMTDQPQA KNPPRGATFR YYLKDALEED QTLRIDIFNA DNELVRTLSS APSAFEKCAK GNEDVRSPIK FKHPSTKAGY NTFVWDLRRE PLNCIENVKL FGGWKGARVM PGDYKAKITV GEQAQTRAFK VLPDPREEAD KAQLQVVEKS IQATETLLND LFAHLQKARD VRAQLSDVIG R
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