Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01501 |
Symbol | |
ID | 6778979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 1609375 |
End bp | 1611897 |
Gene Length | 2523 bp |
Protein Length | 840 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642754937 |
Product | putative secreted serine protease, subtilisin family, possibly excreted |
Protein accession | YP_002125804 |
Protein GI | 196156315 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1404] Subtilisin-like serine proteases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAACAA AGCCTTTTAA AACAGGCCTT TCAGCATTGT CATTAGCCCT ACTTCCGCTA ATGGCGTCTA GTCATGCACA TGCCGCAACA GCCGAAGTCT TCGATGATAG CGTCATCGTG GTTTACAAAG AGAATGTAAG CAAAGCGGAA AAAATGCGTG CCCGTTCATC GGTGGGTGCT CGAATTAGCG ACGCCAATAG AGATGAGATT GACGATCGCT TTTCGAACCT TCTAAATGGT CGTATCGCTA AGCTCCAGCT TCGCGGTAAA TCTGTTAAAG ATGCCATTGA AACACTCAAG AAAAACCCTG CCGTTAAAAT TGCAGAACCA AATTACCTGT ACCGTAAAGC ACTTGTGCCG AACGACCCGT CTTACGGTGA CTTGTGGGGG TTAAACAATA CAGGCCAAGC CGGCGGTACT GACGACGTGG ATATTGATGC GCCAGAAGCG TGGGATATCA CCACCGGTGA CAGTGACGTG GTGATCGGCG TAATAGATAC GGGTGTTGAT TACACCCATG AAGATATCGC TGACAATGCA TGGATGAACC CAGGCGAAAT ACCAGGAAAC GGCATTGATG ACGACGGTAA CGGATATATC GACGATGTAT ATGGTATCGA TACTGCAAAC GGAGATACCG ATCCGATTGA TGACGACTCT CACGGTACAC ACGTCGCAGG TACCATTGGT GCTGTAGGCG GTAACGGTAT CGGCGTGGTG GGCGTAAACC ATGACGTATC AATTGCTGCG TGTAAATTCT TAGGCGCCGA TGGCACAGGC TCTACAGCAG GGGCTATAGA GTGTATTGAT TACTTTACCG ACTTAAAAGA AAACCGCGGC ATAAACATTA AAGCGACCAA TAATAGCTGG GGTGGCGGCG GCTATAGTGA AGCGCTAGAA ACTGCCATTG AAGTCTCTGG GCAGGCAGGC ATACTGTTCG TTGCTGCAGC GGGTAACGCA GGGTCAAACA ACGACAACGT AGATAACTAC CCGTCTAATT ATGTGACGAC GACTAACAGC TTGATGGCTG TTGCCAGTAT CACGCGTAAC GATAGCGATA GTGGCTATTC ATACGGCATT GAAACCGTAG ATATTGCCGC GCCGGGTTCG GCAATTTTAT CAACAATTCC AGGCGATAGT TATGCGGCTT ACTCAGGTAC GTCGATGGCA ACGCCTCACG TTGCTGGTGC CGCTGCGTTA GTATGGTCGC TAAACCCAGA GCTTACGCCT TCAGAAATGA AAGAGTTATT GATGGCAACC GGTGAAACCA GCCTATGGGC TGACGGGCGC ACAGTGTCGG GCAACCGGTT GAATGTGCTA AATGCCCTTG AAGAAGCAGA TCCTACGCCA GGCTTTAAGC TCGGTATTAC GCCGGGCTCT GCTGAGATTG AAGCAGGCGA AGCTTATACC TTCACCATCG AAGTCGGTTC TATTGCTGGC TACGAGGAAG AAGTTCAGCT ATCTCTTGCT GAAGAGAGCG ACATTGCTTC CCTAAGTGCT AACACTGCGA TGCCTGGCGA TACTGTATTA CTTATGGTTG AAACCGCTGA AGACACGCCG TGGGGACAGT ACAGCTTTAC CGTTAACGGC GTGAGTGGCG AGATTGAAAA GTCCAAGTCG GCAAACTTGT ATGTTTACCC TCAAGGTCTC AATGACTTCC CTTATAATTA CTCGGGCGAC CCCGTTCCAA CCCTTCCTAA CGAAGAAGAT CCGGATGATG TGGGCGTAGA CCTTGTTATT AACATACCAG ATGATTTAAC CGTATTCGGT ATGCAGGCTT CGGTAAATAT TACTCATACC TATAGCGGTG ACTTGGTGCT TTCGCTTACT TCTCCTCAAG GTACAACTAC CGTTCTGCGC CAAAACCAAG GCGGCGGTAC TGACGACATT ATTGAAAGCT ACGATACCGA CGCATTTAAC GGCGAAGTTG CTACAGGCGA TTGGACACTG AACGTACTTG ATACCTTTAA TGGCGATAAC GGAACAGTAA ACGATTGGAG CCTAGTAGTT ACTGGCATTG GAGAAGTAGG GCCAACACCG CCAAACGCAG TATTTACTTA CGATGCTTCT GGCTTATCGG TCAGCTTTAC TAACAACAGC AGTGACGTTA ACGACGATAT TGTTAGCTAT AGCTGGGACT TTGGTGACGG CGCCACATCA ACAGAAGAAA GCCCTACCCA CGTATATGCG GGGACTGGTG CTTACGATGT CACGCTAACG GTAACTGATT CAGAGGGGCA GACAGATGTC GCTACTAAAA CTGTAGCCGT TTCTGATAGC AACATTGTTG CAGAAATTGA CCGCGCTATG CTGTCTCGTT TCGGTTCACT AAGAGTTGAC TTATCTTACA GCGGCTCGAT GGCAGATACT GTTATGATTT ATCGCAACGG TGAATTGCTT GAGGAAGTGA GCAACACTGG TCGCTATCGC GACAGAAGTC GAGGTGTTCA ACCTGGTGAA TATACTTATA TGGTATGTGA CGAAACATCA GCATGCTCTG CGCCAGTGAC GGTAAACCTT TAA
|
Protein sequence | MKTKPFKTGL SALSLALLPL MASSHAHAAT AEVFDDSVIV VYKENVSKAE KMRARSSVGA RISDANRDEI DDRFSNLLNG RIAKLQLRGK SVKDAIETLK KNPAVKIAEP NYLYRKALVP NDPSYGDLWG LNNTGQAGGT DDVDIDAPEA WDITTGDSDV VIGVIDTGVD YTHEDIADNA WMNPGEIPGN GIDDDGNGYI DDVYGIDTAN GDTDPIDDDS HGTHVAGTIG AVGGNGIGVV GVNHDVSIAA CKFLGADGTG STAGAIECID YFTDLKENRG INIKATNNSW GGGGYSEALE TAIEVSGQAG ILFVAAAGNA GSNNDNVDNY PSNYVTTTNS LMAVASITRN DSDSGYSYGI ETVDIAAPGS AILSTIPGDS YAAYSGTSMA TPHVAGAAAL VWSLNPELTP SEMKELLMAT GETSLWADGR TVSGNRLNVL NALEEADPTP GFKLGITPGS AEIEAGEAYT FTIEVGSIAG YEEEVQLSLA EESDIASLSA NTAMPGDTVL LMVETAEDTP WGQYSFTVNG VSGEIEKSKS ANLYVYPQGL NDFPYNYSGD PVPTLPNEED PDDVGVDLVI NIPDDLTVFG MQASVNITHT YSGDLVLSLT SPQGTTTVLR QNQGGGTDDI IESYDTDAFN GEVATGDWTL NVLDTFNGDN GTVNDWSLVV TGIGEVGPTP PNAVFTYDAS GLSVSFTNNS SDVNDDIVSY SWDFGDGATS TEESPTHVYA GTGAYDVTLT VTDSEGQTDV ATKTVAVSDS NIVAEIDRAM LSRFGSLRVD LSYSGSMADT VMIYRNGELL EEVSNTGRYR DRSRGVQPGE YTYMVCDETS ACSAPVTVNL
|
| |