| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01497 |
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| Symbol | |
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| ID | 6779173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 1604702 |
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| End bp | 1606144 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642754933 |
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| Product | ATP-dependent RNA helicase RhlE |
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| Protein accession | YP_002125800 |
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| Protein GI | 196156311 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATTTA CCCAATTAGG GCTCGCTGAA CCTTTGTTGA AAGCTATTGA AAAACGTGGG
TTTAGCACAC CATCACCTAT CCAAGAAAAG GCAATTCCAG AAGTATTGGA AGGGAAGGAT
GTGCTAGCAG CGGCGCAAAC GGGAACCGGG AAAACGGCGG GTTTCGGCCT TCCAATTCTA
CAAAGATTGA TGTCGGGTCC AAAGGTGTCT GCTAATAACG TTAGGGCGCT TATTTTGACG
CCAACTCGTG AATTAGCTGC CCAAGTTGAA GAAAGTATTT GCGCATTTAG CGAGTTTTTA
CCGTTAAAAA CAGCCGTCGT ATTTGGTGGT GTAGGCATTA ACCCTCAAAT GATAAAGTTA
CGCAAAGGCG TAGATGTACT TATCGCAACA CCAGGCAGGT TGTTAGATTT ATATCAGCAA
AACGCGGTGA AGTTTTCTCA ACTTGAAGTT TTGGTATTAG ATGAAGCCGA CAGAATGTTA
GATATGGGCT TTATTCACGA TATTAAGAGA GTGCTTAAAC TGTTGCCTGA AGACCGTCAA
AGCTTACTTT TCTCAGCCAC CTTTTCTGAC GAAATAACCA CGCTGGCCAA AACCATTACA
CGCAACCCGG TAAGTATTTC AACCGCGCCG GCTAACACTA CCGTCGATGC TGTAGAGCAG
CATCTAGTGA CCATTGATAA ATCAAAAAAA ACCACTGCGC TTATTTGTTT GATAAAACAA
CAAAAGTGGG AACAGGTACT CGTATTTAGC CGCACAAAAC ACGGCGCCAA CCGCATTGCA
GAAAAGTTGA CTCGGTCAAA AATTCCTAGT GCAGCTATAC ATGGTAATAA AAGCCAAGGG
GCGAGAACAA AAGCCCTCGC TGATTTCAAA AATGGTGATA TAAAAGTACT GGTTGCCACC
GATATTGCGG CCCGTGGTAT TGATATCAGT GAATTACCTA TTGTGGTAAA TCTTGATTTG
CCAAATACGG CAGCTGACTA CGTACATAGA ATAGGCCGTA CTGGACGTGC TGGTGCCAGC
GGCCAAGCTT GGTCATTTGT TAGCGCCGAA GAGCTACAGA ATCTTAAAGA TATAGAGACA
CTTATTCAAA AATTGCTTCC TCGTGAAACG CTAGAAGGGT TTGAGCCTCA GCAAGTTGTA
CCGCCTACAA CGCTATCTAA ACCGAAAAAG CCCAAGAAAG CGAAAAAGCC GAAAGCCCCC
CAAGGTGAAG GTAGCAGCCA GAGTGAAAAA GGCGCGCAAA GTAAAAGAAA TGGGCAAAGT
ACAAATAACA GAAGCGGAAA CGGTGGTAAT CGCTCAAGTA AATCCAATGG ACGAGGAAAT
ACGAGTGGTA AACCTGTTAG GCAAAGAAAT ACTGGCTCTG AGGGCAATGG TACTCGTCGC
CCATCAAAGC GCCGAAGCAG TAACGTGTCA AACCAAAGCA GTGCATCGAG TGCTAAGGCT
TAA
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| Protein sequence | MSFTQLGLAE PLLKAIEKRG FSTPSPIQEK AIPEVLEGKD VLAAAQTGTG KTAGFGLPIL
QRLMSGPKVS ANNVRALILT PTRELAAQVE ESICAFSEFL PLKTAVVFGG VGINPQMIKL
RKGVDVLIAT PGRLLDLYQQ NAVKFSQLEV LVLDEADRML DMGFIHDIKR VLKLLPEDRQ
SLLFSATFSD EITTLAKTIT RNPVSISTAP ANTTVDAVEQ HLVTIDKSKK TTALICLIKQ
QKWEQVLVFS RTKHGANRIA EKLTRSKIPS AAIHGNKSQG ARTKALADFK NGDIKVLVAT
DIAARGIDIS ELPIVVNLDL PNTAADYVHR IGRTGRAGAS GQAWSFVSAE ELQNLKDIET
LIQKLLPRET LEGFEPQQVV PPTTLSKPKK PKKAKKPKAP QGEGSSQSEK GAQSKRNGQS
TNNRSGNGGN RSSKSNGRGN TSGKPVRQRN TGSEGNGTRR PSKRRSSNVS NQSSASSAKA
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