Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01495 |
Symbol | |
ID | 6778821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 1602076 |
End bp | 1603446 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642754931 |
Product | sensory box/GGDEF family protein |
Protein accession | YP_002125798 |
Protein GI | 196156309 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGGCA ACATACAGGC CGAATCTGAA GCCAATCAGC AAAAGAATGC ATTGTTAGAA AAGCAGCAGT CACAGATGGA ACGCCTTGCC AATTTCGACG CGCTCACCGG TTTACCTAAT CGACAATTTT TAATGAAAAT CCTGTCTAGT GAACTGACTA AGGCGCGAAC GAACCGTAGT GAACTTGGCC TTCTTTTTGT GGATATTGAT GGCTTTAAGT CTATTAATGA CTCATTCGGC CATGATACCG GCGATAAATT TTTATTACAT ATAAGCGTGA TCATGAGCAA GCTGCTTGAC GAAGCCTATA CGCTAGGTCG CTTGGGGGGC GATGAGTTTA TTATAATAGC ACCAGATATA GGTGACCCAA AGACGCTAGA AGATATGGCT GCCAAGCTTG TAGTCGCAGT GTCTCGTACC CATAATTTTA ACACATTGCG ATTAGACTCA GGCGTAAGTG TTGGGCTTGC CCTCGCCAGT GACTGTAACT ATGAGCTTTC AAGCCTCATA ACCAACGCAG ACGTAGCAAT GTACAAAGCC AAGGGCAGTG GTAAGGCGAG GTTTATGTGG TTCAACGAGG AAATGCTTGC CGACACTAAG CGAAAAGTAC TCATCTCGAC CCGTCTATCT AGTGCATTAG AAAATGATGC GTTTTATCTG GCTTATCAAG CAAAAGTCGA CGCTGAACAA AATATCATAG GGTTCGAAAC ACTTTTGCGT TGGCATGATG ATGTACTCGG TCACGTGTCG CCCGCAGAAT TCATTCCAAT TGCAGAGCAA ACCGACAAGA TTTCATTAAT TAGTATGTGG ATTATAAAGC GATTGGAAAT TGAAGCCCCC CGCTTAATCA AGTCCTTCGG TTCGCAAATT ATTATATCGA TAAACTTGAG TCCACAAGAC TTAAATAGCG AAAAGTTAAC CCAATTCATA TTGAAGGGAA TGAGAGAAAA CAAGCTACCG GCAAAAAACC TTGAGATTGA GATTACCGAA ACCGCGTATA TGAATAACTT CAACGTGGCT AATAGCTTTT TCGAATCGAT TAAGCATTAT GGTTGTCAGC TTGCGTTGGA TGACTTCGGT ACCGGTTACT CATCGCTAAG TTACTTGACC AAGTTTGATA TCGACACATT GAAGATAGAC AGAAGCTTCG TCAACAACAT TGGCATTTCT GAGCAATCAG AACTCATCAC AAAAACCATT ATAAAAATGG CAAAAAGCTT AAACTTCTCG GTCTGTGCGG AAGGCGTAGA AACCCGAGAA CAGGCGACAT TTTTACTTCA AAATGGGTGT CATGCGCTTC AAGGGTTTCT TTACAGTAAG CCCATTCCCC TTGAAGACGT TTTAGCTACC TCACGAAGGC GCGCCTTATA A
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Protein sequence | MMGNIQAESE ANQQKNALLE KQQSQMERLA NFDALTGLPN RQFLMKILSS ELTKARTNRS ELGLLFVDID GFKSINDSFG HDTGDKFLLH ISVIMSKLLD EAYTLGRLGG DEFIIIAPDI GDPKTLEDMA AKLVVAVSRT HNFNTLRLDS GVSVGLALAS DCNYELSSLI TNADVAMYKA KGSGKARFMW FNEEMLADTK RKVLISTRLS SALENDAFYL AYQAKVDAEQ NIIGFETLLR WHDDVLGHVS PAEFIPIAEQ TDKISLISMW IIKRLEIEAP RLIKSFGSQI IISINLSPQD LNSEKLTQFI LKGMRENKLP AKNLEIEITE TAYMNNFNVA NSFFESIKHY GCQLALDDFG TGYSSLSYLT KFDIDTLKID RSFVNNIGIS EQSELITKTI IKMAKSLNFS VCAEGVETRE QATFLLQNGC HALQGFLYSK PIPLEDVLAT SRRRAL
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