Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01491 |
Symbol | |
ID | 6778935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 1599643 |
End bp | 1600254 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642754927 |
Product | putative 4-hydroxy-2-oxoglutarate aldolase |
Protein accession | YP_002125794 |
Protein GI | 196156305 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase |
TIGRFAM ID | [TIGR01182] Entner-Doudoroff aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGA TATCAGAAGT TATGGGCAAG CAACAATTGC TTCCTATCAT TCAAGCAGAT AATGAAGCTG ACGGCGTGGC GATCGCTCGC GCAATGTCAG AAGCGGGACT GACGACCGTA GAAGTGGTTT TGCGCACAGA GCACTCTGCG AAATGTATTA GCGCTATTAA AGCGGCGTTG CCGCACATGA TTGTTAGTGC TGGTACCGTC ATTGATAAAG CATCACTTGA TGCCGCGATA AATGCCGGGG CAGACTTTAT TGTTACACCA GCGGTAACTG AACGTTTGCT TACCATGCTA GTAGCATCGG GGTTACCTGT GCTTCCTGGT GTGTCAAACG TGTCTGATAT TGTACTGGCA AGAGAACATG GCTTTAGAGA AATGAAATTG TTTCCAGCGT CACTATCTGG CGGCGCGGCT TTTCTAAAAG CCGTAGGAGG TTTGTTTAAA GACACACGAT TCTGCCCAAC CGGTGGAGTA TCGCCCGACA ACTTTAATGA TTACCTTGCA TTAAATAACG TATTTGCTGC AGGTGGTACC TGGGTTGCTA AACCGCAATG GGTTGCAGAT AAGCAATGGG ACCTTATTAC ACAGGCGTGC CTACAGGTTT AA
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Protein sequence | MKKISEVMGK QQLLPIIQAD NEADGVAIAR AMSEAGLTTV EVVLRTEHSA KCISAIKAAL PHMIVSAGTV IDKASLDAAI NAGADFIVTP AVTERLLTML VASGLPVLPG VSNVSDIVLA REHGFREMKL FPASLSGGAA FLKAVGGLFK DTRFCPTGGV SPDNFNDYLA LNNVFAAGGT WVAKPQWVAD KQWDLITQAC LQV
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