| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01479 |
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| Symbol | |
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| ID | 6779184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 1589327 |
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| End bp | 1591006 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642754915 |
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| Product | dioxygenase, ferredoxin reductase component, putative |
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| Protein accession | YP_002125782 |
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| Protein GI | 196156293 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1251] NAD(P)H-nitrite reductase
[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTTA ATGTTTTCAA TGCGCGAATA GGAATAAAAC TTGATGGTTT AGAGTCTCGC
AATACTTCCT TGCTGGCACA CGGTGTCGGC GCCCATTTGG ATAAGGAGCC TCTCATGTCA
TTTATCTCAG CCGGTCCTGC AGACCGCCTT GAAAACCTCA AACCTAAACG CGTTACCCTT
AACGATACAG AAATTCTTCT CATTCGTGAC GGTGAAAACG TTTATGCCAG CAGCGCCGAT
TGCCCTCATA AAGGTGCGCC TCTTGAAGAT GGTGCAGTAT GTCGAGGCAA GTTGGTTTGC
CCATGGCATA AAGGCACTTT TGATATCGCC TCTGCTGATG TATGCGAGCC ACCTGCACTA
ACAGGATTAT CTCGGTATGC GGTTGAAATA CGTGACGGCG AGGTACTTGT GGATCCCGAA
CAGGCCACCG ACAGCACCGA TAAACGACAA AACCGATTAA CTGCAGTTAA CGCACATTCT
CATATTGTGA TTGTCGGCGC TGGCGCAGCA GGCGCTGCCG CTCTGCAAAG TCTGGTGAAC
AATCGTTACC ACGGTCGGAT CACTGTTGTT GATCCAGAAG CAGATGCACC TTATGACCGA
ACACTGCTTA CCAAAGCTGT GACAGCGGGC GACATGGAAC CTGATGAGGT AGACCCCCTT
GTTAATCAAG ACGACATGGA TATCACAGAA GTTACACGCC TAGTGGCTAA AGTATCCGGA
ATTGATACTG CCGCCCATCA AATTGAGCTA TATGATGGTC AATCGTTGGC ATACGATCGA
TTACTTATTG CCACAGGCGG GATCCCCGTC CGGCCGGATT TACCCGGCGT TAATTTGTTG
GGGATCCATA CGCTTCGAAA TATTGAGCAT GTGGAAAGTC TATTAGCTGA CGTTGAAAAC
ACGAACAATA TTACCATTGT TGGCAACAGT TTTATTAGTC TGGAAGTGGC CGCTTCATTA
AAGCAGCGTA GCGACAATAT ACGGGTAAAG GTTATCGCAC CTGATGCGGT ACCGTTTGAA
AAACAATTTG GAACCCAAAT CGGGCAGTAT TTCCGTGATT TACACGAGAA GCATGACGTC
GAGTTTGTCG AGGGCACAGT AAGTGGATTT CATGGTACTG AAAAAGTAGC CGCAGTGAAG
CTGGAAAGTG GCGAAATGTT GGAAACCAAT CTGGTGCTGC TAGCTACCGG CATAACGACT
GATAAAGATT TACTCAATAG CTTTACATTA ACGCACCAGG GATTGGTGAA AGTGAACGAA
TTCCTTGAAG CTGCTGAAGA TGTCTATGCG GTGGGTGATA TTACCAGCTA TCCGTATAAT
GGCGAAGAAA TGCACATTGA GCACTGGCGA CTAGCCCAGC AGCATGGTCG TTGCGCAGCA
GAAAATATAC TCGCGAGCCT AGCCTACCCT GCCGAACGTA AAGCATTTGA TCGCACCCCT
TATTTCTGGA CACAGCAATT TGATGTAAAG TTTGAATACG TAGGTCATGC AAAAGAGTGG
GACGAAATCG AAGCGGTGGG CACACCGGAA GATGAACAAT ACCTCGCTGT TTTTCGCAAA
GATGGTAAGG AAATCGCCGT TCTGGCTAAA GGTTATCCTC AGCTGACAGC AAAAATGGTG
ATTGAGATGG ACGACCATGT TGCGCTGTCA TCGCTAAAAG CTGTACTTGA AGCTGCTTAA
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| Protein sequence | MKFNVFNARI GIKLDGLESR NTSLLAHGVG AHLDKEPLMS FISAGPADRL ENLKPKRVTL
NDTEILLIRD GENVYASSAD CPHKGAPLED GAVCRGKLVC PWHKGTFDIA SADVCEPPAL
TGLSRYAVEI RDGEVLVDPE QATDSTDKRQ NRLTAVNAHS HIVIVGAGAA GAAALQSLVN
NRYHGRITVV DPEADAPYDR TLLTKAVTAG DMEPDEVDPL VNQDDMDITE VTRLVAKVSG
IDTAAHQIEL YDGQSLAYDR LLIATGGIPV RPDLPGVNLL GIHTLRNIEH VESLLADVEN
TNNITIVGNS FISLEVAASL KQRSDNIRVK VIAPDAVPFE KQFGTQIGQY FRDLHEKHDV
EFVEGTVSGF HGTEKVAAVK LESGEMLETN LVLLATGITT DKDLLNSFTL THQGLVKVNE
FLEAAEDVYA VGDITSYPYN GEEMHIEHWR LAQQHGRCAA ENILASLAYP AERKAFDRTP
YFWTQQFDVK FEYVGHAKEW DEIEAVGTPE DEQYLAVFRK DGKEIAVLAK GYPQLTAKMV
IEMDDHVALS SLKAVLEAA
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