| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01472 |
|---|
| Symbol | |
|---|
| ID | 6777154 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 1582998 |
|---|
| End bp | 1583519 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 642754908 |
|---|
| Product | ISSod6, transposase |
|---|
| Protein accession | YP_002125775 |
|---|
| Protein GI | 196156286 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3293] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAACAG ATGATGCGTG GGAAATCCTA AAAGTACTGC TAAAGGAGAG TGGCAGAGTC
TATAACAAAT ATGAGCACCG AAATACCCTG GAGGGCATAC TTTACCGAAT GCGTACCGGC
ATTCAGTGGC GGGATTTGCC ATCTGAATTT GGTCTCTGGA ATACGGTCTA CCGACGATTT
AATTTATGGT CGAAGAAAGG CATATTGCAA AAGTTATTTG AAAGCTTAGC CTCCGAGGGT
GACCCAGAAT GGTTGTTTCT TGATGGTAGT ATAGTTAAAG CGCATCAGGA TAGTAGCGGT
GCAGCGGGTA AACAAGATGA GGCCATCGGA AAAAGTCGAG GTGGTAACTC AACGAAAATT
CACCTTGCGG TAGATAGCGG TGGCCTGCCC GTTTATTTTG AACTATCCGG TGGTCAAGTG
AACGACATCG TACATGCACA AAGTCTGATA ATAAACTCCC CACAAGCCGA TATTGTTTGT
GCTGATAAGG CTATGACAGT GAAGCTTTTA GAGCTTACGT AG
|
|---|
| Protein sequence | MLTDDAWEIL KVLLKESGRV YNKYEHRNTL EGILYRMRTG IQWRDLPSEF GLWNTVYRRF
NLWSKKGILQ KLFESLASEG DPEWLFLDGS IVKAHQDSSG AAGKQDEAIG KSRGGNSTKI
HLAVDSGGLP VYFELSGGQV NDIVHAQSLI INSPQADIVC ADKAMTVKLL ELT
|
|---|
| |