Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01459 |
Symbol | |
ID | 6775190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 1564558 |
End bp | 1565379 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642754897 |
Product | membrane protein |
Protein accession | YP_002125764 |
Protein GI | 196156275 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAATTAG AACTACTGTG GTTTGTAGTT ACTTTATGTA TTACCGGTAC TATTGCAGGC ATTACAGCAG GCCTATTTGG TAATGGCGGT GGGTTTGTGG TTGTGCCGGC ATTGCTTGCC GTTTTTCCCT TTTTTACTCC CCCTTCAGAA GCATTGGTTA AAGTTGCAAT AGGGACGTCT TTAGCGTCTA TCGTTGTTTC TAGTGCTCGG TCTGTGATGG CGCACCGTGC GAAAGGCGCT GTTGATTTTG ACATTCTTCG CTCGTGGAGT ATATGGCTTA TTCTTGGCGT TGGCGGTGGG TTACTGATTG CTAACAACTC AAGCGCCAAC GGGCTAACCG TTGTATTCGC TGCAGGCGTT CTACTATATT CGGTCTATTT TCTTTTCCCT GAGTTCGTCG TGCGACCCGG GCTTGTTTTC AACATGCCTA AGGGTATTGG TAAAGCTGTG CTGGCGTTTG TACTCGGCGG CTTTTCTGCA TTACTTGGTA TAGGCGGCGG CACCCCTACT GTTATCACCA TGGTTATGTG TCAGCGAACC ATACAGCAAG CGGTAGCAAC CGCAGCTGGC GTAGGCTTTT TAATTGGTCT TCCAGGTGCG ATAGGCTTTT TGTTCATGAA GCATCCCGAC ACTGCCTCAC TTCCGGTAGG CACCATCGGT TACATCAATA TTCCCGCCCT TGTTGCAATT AGTATTGGTG CGATCTTCAC CGCGCCAATT GGCGCCAAGA TGGCGCACAA CTTCAGCGAG AAGAAGTTAA AACGCTTATT TGGTATTTAC CTCGTTATTG TATCGAGCGC CATGTTTTAT AAAGCCATAT AA
|
Protein sequence | MELELLWFVV TLCITGTIAG ITAGLFGNGG GFVVVPALLA VFPFFTPPSE ALVKVAIGTS LASIVVSSAR SVMAHRAKGA VDFDILRSWS IWLILGVGGG LLIANNSSAN GLTVVFAAGV LLYSVYFLFP EFVVRPGLVF NMPKGIGKAV LAFVLGGFSA LLGIGGGTPT VITMVMCQRT IQQAVATAAG VGFLIGLPGA IGFLFMKHPD TASLPVGTIG YINIPALVAI SIGAIFTAPI GAKMAHNFSE KKLKRLFGIY LVIVSSAMFY KAI
|
| |