| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01438 |
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| Symbol | |
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| ID | 6779122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 1533999 |
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| End bp | 1534739 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642754873 |
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| Product | Transcription negative regulator ChrR |
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| Protein accession | YP_002125743 |
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| Protein GI | 196156254 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3806] Anti-sigma factor |
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| TIGRFAM ID | [TIGR02451] anti-sigma factor, putative, ChrR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTAGGT TTCACCCAAG TGCCCGACAG CTGTCAGACT TTGTTGAGGG CACATTGTCA
CCCGCAATAT CATTGATGGT CTCAGCACAT TGCGATATGT GCGAGAAGTG TCAGCGTTTT
GTTGAGGTCG AAACAGAACG TCTTGCTAAG GATCTCGTAT CTGGCGCAGG TGTAGGTGAC
AAGTTAGAGG TATCGTTTCA ATTAGATGAG ATGCTCTCTC AGATTACTCA ACTTCCTACA
GCACCGCAAA TCGAATCAAA AGCAATCAAA GCTAACAACG CTGTTGCTTC ACCACGCAAT
CAAGAAGCGA ACATCAGTCA GCGCAAGGCT ACGAATGCGA TAGAGCTAGA CGGAAGAGTC
TTTACGCTAC CCAGAACGTT ACATCGCTAT ATCGATAAGA CGGGAAATTG GTCGAGTCTA
GTTGGAAAGC TATGGCAAGC GCCCGTAGAT TTAGGTAACC AAGGCGTTGC GAACTTCATT
TTTATGGGGC GGGGCGGAAG CGTACCAGAA CATACCCACC GCGGCACCGA ATACACGCTA
GTTATCGACG GAGAATTCAG TGACGGCTTA AATCGCTACG ATACTGGGGA TTTTATTTTC
ATGGATGGAG AGAAAACTCA CACGCCAAAG TCTGAAGACA AAGACGGGTG TCTTGTTTTT
AGTATCGTCG ACCAGCCACT CCATTTTACG TCTGGTTTGG CGAGATTGTT AAACCCCTTT
AGCCACCTGT TTTTCAGATA G
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| Protein sequence | MIRFHPSARQ LSDFVEGTLS PAISLMVSAH CDMCEKCQRF VEVETERLAK DLVSGAGVGD
KLEVSFQLDE MLSQITQLPT APQIESKAIK ANNAVASPRN QEANISQRKA TNAIELDGRV
FTLPRTLHRY IDKTGNWSSL VGKLWQAPVD LGNQGVANFI FMGRGGSVPE HTHRGTEYTL
VIDGEFSDGL NRYDTGDFIF MDGEKTHTPK SEDKDGCLVF SIVDQPLHFT SGLARLLNPF
SHLFFR
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