| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01437 |
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| Symbol | |
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| ID | 6779146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 1533395 |
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| End bp | 1534006 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 642754872 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_002125742 |
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| Protein GI | 196156253 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.69658 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTAGTTG GAATTCCTTT GGAACAAAGT AACAGCACAA TCAAACCTAA AGAGTGTGCT
ACTGAAATGT CTGATTACCT AGTCGCGGTT GCAGATGCTC GATGCAAGCG TTCATTTGCT
CGAGTGTTCA ACTATTTTGC CCCACGTTTG CGCTCTTATG CCCTTAAGCA GATGGGGAAC
GAAGCACTAG CAATGGAGCT TGTACAAGAC ACCATGTCAA ACGTTTGGCA AAAAGCGCAT
TTGTTTAATG CTGAGAAAGG CTCGCCTTCT ACGTGGATTT TCACTATTGC ACGTAACATA
CGGTTTGACA TGTTACGCAA GCTTCAAAAT AGAAAAGAGG ACGTGTGCTC TGACGACCTG
TGGCCTGTGT TATGTGAGCA GACGGCAGAT GTGAATGAGG CGCCACTTGA CGAGCAAGTA
ACTCTAGAGC AAATTGGCTA TATGTTTGAA TCACTTCCGG TTAAACAAAA GGCGGTGGTA
GAAGCTATCT ATATTGATGG CAAATCTCAG CAAGAAGTCG CTGACGAACT TTCTATTCCC
TTAGGTACAG TAAAGTCAAG AACTCGCTTA GCGCTTCAAC GATTAAAGGT CATGTTAAAC
GATAATGATT AG
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| Protein sequence | MLVGIPLEQS NSTIKPKECA TEMSDYLVAV ADARCKRSFA RVFNYFAPRL RSYALKQMGN
EALAMELVQD TMSNVWQKAH LFNAEKGSPS TWIFTIARNI RFDMLRKLQN RKEDVCSDDL
WPVLCEQTAD VNEAPLDEQV TLEQIGYMFE SLPVKQKAVV EAIYIDGKSQ QEVADELSIP
LGTVKSRTRL ALQRLKVMLN DND
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