Gene MADE_01428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01428 
Symbol 
ID6779204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp1526205 
End bp1526966 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content46% 
IMG OID642754863 
Productflagellar motor protein PomA 
Protein accessionYP_002125733 
Protein GI196156244 
COG category[N] Cell motility 
COG ID[COG1291] Flagellar motor component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTAG CAACCGTCAT AGGTATGTTG GGCGCCATTG GTTTCATAGT TATGGCTATG 
ATCTTAGGCG GCAGCTTGGG CATGTTCATC GACGTCCAGT CAATACTTAT CGTATTCGGG
GGGACCTTAT TCGTTGTTTT GTCACAATTT ACGTTAGGTC AGTTTTTTGG CGCAGGTAAA
ATTGCAGGCA AGGCCTTCAT GTTCAAAATT GAATCGCCTG AAGAGCTTAT TGAGAAAATT
GTTGAAATGG CAGATGCCGC GCGAAAAGGT GGCTTCCTTG CGCTAGAAGA GGCGGAAATT
TCAAACGAAT TTATGCAAAA AGGCGTCGAT ATGCTGGTCG ACGGCCATGA TATTGAAGTA
GTCAGAGAGA CTCTCGCTAA AGATATTTCA ATGACTTCCG AACGCCATGA TTTTGGTGCT
TCATTTTTCA AAGGCATGGG TGATATTGCA CCGGCAATGG GAATGATTGG TACACTGATC
GGCTTGGTAG CCATGCTCTC TAATATGGAT GACCCAAAAG CAATTGGGCC CGCGATGGCG
GTTGCACTAC TTACCACGCT TTACGGTGCT TTCTTTGCCA ATGTTATATG TTTGCCAATT
GCATTTAAAT TGTCAGTGCG CGCCGGCGAG GAAAAGCTAA ACCAGAGCCT TGTTCTTGAC
GGAATAGTCG GTATCGCAGA TGGTCAGAAC CCTCGGGTGA TAGAGGGAGT ACTAAAGAAT
TACCTTGCGG CGAGTAAACG CGGAAGCGCA GAGGAAGAGT AA
 
Protein sequence
MDLATVIGML GAIGFIVMAM ILGGSLGMFI DVQSILIVFG GTLFVVLSQF TLGQFFGAGK 
IAGKAFMFKI ESPEELIEKI VEMADAARKG GFLALEEAEI SNEFMQKGVD MLVDGHDIEV
VRETLAKDIS MTSERHDFGA SFFKGMGDIA PAMGMIGTLI GLVAMLSNMD DPKAIGPAMA
VALLTTLYGA FFANVICLPI AFKLSVRAGE EKLNQSLVLD GIVGIADGQN PRVIEGVLKN
YLAASKRGSA EEE