Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01428 |
Symbol | |
ID | 6779204 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 1526205 |
End bp | 1526966 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642754863 |
Product | flagellar motor protein PomA |
Protein accession | YP_002125733 |
Protein GI | 196156244 |
COG category | [N] Cell motility |
COG ID | [COG1291] Flagellar motor component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTAG CAACCGTCAT AGGTATGTTG GGCGCCATTG GTTTCATAGT TATGGCTATG ATCTTAGGCG GCAGCTTGGG CATGTTCATC GACGTCCAGT CAATACTTAT CGTATTCGGG GGGACCTTAT TCGTTGTTTT GTCACAATTT ACGTTAGGTC AGTTTTTTGG CGCAGGTAAA ATTGCAGGCA AGGCCTTCAT GTTCAAAATT GAATCGCCTG AAGAGCTTAT TGAGAAAATT GTTGAAATGG CAGATGCCGC GCGAAAAGGT GGCTTCCTTG CGCTAGAAGA GGCGGAAATT TCAAACGAAT TTATGCAAAA AGGCGTCGAT ATGCTGGTCG ACGGCCATGA TATTGAAGTA GTCAGAGAGA CTCTCGCTAA AGATATTTCA ATGACTTCCG AACGCCATGA TTTTGGTGCT TCATTTTTCA AAGGCATGGG TGATATTGCA CCGGCAATGG GAATGATTGG TACACTGATC GGCTTGGTAG CCATGCTCTC TAATATGGAT GACCCAAAAG CAATTGGGCC CGCGATGGCG GTTGCACTAC TTACCACGCT TTACGGTGCT TTCTTTGCCA ATGTTATATG TTTGCCAATT GCATTTAAAT TGTCAGTGCG CGCCGGCGAG GAAAAGCTAA ACCAGAGCCT TGTTCTTGAC GGAATAGTCG GTATCGCAGA TGGTCAGAAC CCTCGGGTGA TAGAGGGAGT ACTAAAGAAT TACCTTGCGG CGAGTAAACG CGGAAGCGCA GAGGAAGAGT AA
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Protein sequence | MDLATVIGML GAIGFIVMAM ILGGSLGMFI DVQSILIVFG GTLFVVLSQF TLGQFFGAGK IAGKAFMFKI ESPEELIEKI VEMADAARKG GFLALEEAEI SNEFMQKGVD MLVDGHDIEV VRETLAKDIS MTSERHDFGA SFFKGMGDIA PAMGMIGTLI GLVAMLSNMD DPKAIGPAMA VALLTTLYGA FFANVICLPI AFKLSVRAGE EKLNQSLVLD GIVGIADGQN PRVIEGVLKN YLAASKRGSA EEE
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