| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01422 |
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| Symbol | nusB |
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| ID | 6779048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 1520612 |
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| End bp | 1521034 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642754857 |
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| Product | transcription antitermination protein NusB |
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| Protein accession | YP_002125727 |
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| Protein GI | 196156238 |
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| COG category | [K] Transcription |
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| COG ID | [COG0781] Transcription termination factor |
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| TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0163631 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGTTT CAGCTCGTCG TAAAGCCCGT GAACTCGCCT TGCAAGGCGT GTATTCATGG
CAAATGAGTC ACAACGATAT ACAGCAGGTT GAACTGGCGC TAGCCACCAG TAACGACATG
CAAAAGGTAG ACATGGCGTA TTTTCAAGCC TTGCTGCGCG GAGTTGCGCA TAACGCAAGT
AAGCTTGATG CGACGATTAA ACCTTATCTT GGCCGTCTGC CTGAAGAGCT AGACGCGATA
GAAAAAGCGA TCTTGCGCAT TGCGACGCTG GAACTGACTG AGCGCATTGA TGTACCTTAT
CGCGTAATTA TTAATGAAGC GATTGAGCTC GCTAAGGCAT TCGGTGCCGA AGAGAGCCAT
AAATTCATTA ATGGTGCACT GGATAAAGCA GTGCGCACGT TGCGCAAAGA TGAGCGCGAC
TAA
|
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| Protein sequence | MKVSARRKAR ELALQGVYSW QMSHNDIQQV ELALATSNDM QKVDMAYFQA LLRGVAHNAS
KLDATIKPYL GRLPEELDAI EKAILRIATL ELTERIDVPY RVIINEAIEL AKAFGAEESH
KFINGALDKA VRTLRKDERD
|
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