Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01406 |
Symbol | |
ID | 6779041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 1508061 |
End bp | 1508864 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 642754841 |
Product | Transposase Tn3 |
Protein accession | YP_002125711 |
Protein GI | 196156222 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4644] Transposase and inactivated derivatives, TnpA family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTACGC AAGTCATTGG CGCTAACGAA TATGAAGGTC ACTTTGCTTT TGACTTACTC TATAACAACT CTTCAGATAT ACAGCCTAAT ACCTTATCGA CCGATACGCA TGGTACCAAT AATGTTAACT TCGCTATATT AGATTTCTTT GGTTACACAT TCGCCCCTCG ATACGCGAAA ATGAAAAAGG TGTTTTTTGA GCTATTTGAA GTGACTGAAG AGAACGGAGG CCGTATTCAA TTAAAGAAAG ATATTAATCA TAAGCTAATT GCTGAAGAAT GGGACAATAT TCAGCATATT GTTTGTTCAT TGAGTCGTAA AACCACCACT CAAAGCACAA TCATTAGAAA GTTGAGTAAC GGCAAGAGCC GAAGATTGTC AGCATTGCAT GAGTACGACC GTTTAATTAA ATCTATTTAT GTTTTGGAGT ATGTTGATAA TTCAACGTTG CGTCATTACG TCCAGCAAGC CTTGAACAGA GGTGAAGCAT ACCATCAGTT AAAACGTGCT ATTACTTCAG TTAATGGCAA TAAATTTCGT GGGGGGAATG ATTACCAAGT ATCACAATGG AACGATTGTG CTCGACTCAT TTCAAATTGC ATTATTTATT ATAATTCCGC GTTACTATCG GCATTTTTAC AAATCCAAGA GAGGAACGGT AGGCAAGATG TGGTTGATGT TATTTCTCGG CTTTCACCTG TTGCTTGGCA ACACATTAAT CTAAATGGGG AATATGCCTT TAATAAAGAC CGCAAAGAAA TCGACTTAGC TGGTTTACTT AGTGATGTAG AATCAATAAG TTAA
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Protein sequence | MSTQVIGANE YEGHFAFDLL YNNSSDIQPN TLSTDTHGTN NVNFAILDFF GYTFAPRYAK MKKVFFELFE VTEENGGRIQ LKKDINHKLI AEEWDNIQHI VCSLSRKTTT QSTIIRKLSN GKSRRLSALH EYDRLIKSIY VLEYVDNSTL RHYVQQALNR GEAYHQLKRA ITSVNGNKFR GGNDYQVSQW NDCARLISNC IIYYNSALLS AFLQIQERNG RQDVVDVISR LSPVAWQHIN LNGEYAFNKD RKEIDLAGLL SDVESIS
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