Gene MADE_01406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01406 
Symbol 
ID6779041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp1508061 
End bp1508864 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content37% 
IMG OID642754841 
ProductTransposase Tn3 
Protein accessionYP_002125711 
Protein GI196156222 
COG category[L] Replication, recombination and repair 
COG ID[COG4644] Transposase and inactivated derivatives, TnpA family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACGC AAGTCATTGG CGCTAACGAA TATGAAGGTC ACTTTGCTTT TGACTTACTC 
TATAACAACT CTTCAGATAT ACAGCCTAAT ACCTTATCGA CCGATACGCA TGGTACCAAT
AATGTTAACT TCGCTATATT AGATTTCTTT GGTTACACAT TCGCCCCTCG ATACGCGAAA
ATGAAAAAGG TGTTTTTTGA GCTATTTGAA GTGACTGAAG AGAACGGAGG CCGTATTCAA
TTAAAGAAAG ATATTAATCA TAAGCTAATT GCTGAAGAAT GGGACAATAT TCAGCATATT
GTTTGTTCAT TGAGTCGTAA AACCACCACT CAAAGCACAA TCATTAGAAA GTTGAGTAAC
GGCAAGAGCC GAAGATTGTC AGCATTGCAT GAGTACGACC GTTTAATTAA ATCTATTTAT
GTTTTGGAGT ATGTTGATAA TTCAACGTTG CGTCATTACG TCCAGCAAGC CTTGAACAGA
GGTGAAGCAT ACCATCAGTT AAAACGTGCT ATTACTTCAG TTAATGGCAA TAAATTTCGT
GGGGGGAATG ATTACCAAGT ATCACAATGG AACGATTGTG CTCGACTCAT TTCAAATTGC
ATTATTTATT ATAATTCCGC GTTACTATCG GCATTTTTAC AAATCCAAGA GAGGAACGGT
AGGCAAGATG TGGTTGATGT TATTTCTCGG CTTTCACCTG TTGCTTGGCA ACACATTAAT
CTAAATGGGG AATATGCCTT TAATAAAGAC CGCAAAGAAA TCGACTTAGC TGGTTTACTT
AGTGATGTAG AATCAATAAG TTAA
 
Protein sequence
MSTQVIGANE YEGHFAFDLL YNNSSDIQPN TLSTDTHGTN NVNFAILDFF GYTFAPRYAK 
MKKVFFELFE VTEENGGRIQ LKKDINHKLI AEEWDNIQHI VCSLSRKTTT QSTIIRKLSN
GKSRRLSALH EYDRLIKSIY VLEYVDNSTL RHYVQQALNR GEAYHQLKRA ITSVNGNKFR
GGNDYQVSQW NDCARLISNC IIYYNSALLS AFLQIQERNG RQDVVDVISR LSPVAWQHIN
LNGEYAFNKD RKEIDLAGLL SDVESIS