Gene MADE_01397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01397 
Symbol 
ID6779222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp1499938 
End bp1500525 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content43% 
IMG OID642754834 
ProductSmr domain (Small MutS Related) containing protein 
Protein accessionYP_002125705 
Protein GI196156216 
COG category[S] Function unknown 
COG ID[COG2840] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.597905 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCACT TTGAAAACGA CGATATCGAT TCGTTTTTTG CTGAAATGCA AGATGTAAAA 
CCTATTACTT CAGATGACAA GGCTTTATTA CACGACCCTG AAAAGGCGCT CGCCGAAAAA
CAAAAGCGAG CAGCCTTGAA GTTAAGCGTT CGCGACAAAC TCGCTAATCC ACTGAGCATG
GATGGTGTAA AGCCAATACC GCCTGATGAC TTTATACATT TCCAGCAGCC AGGCATACAA
GATGGTGTGT TTAAAAAACT GCGTCTTGGT AAATATCCGT TGGAAACCAA CCTAACGCTA
TCAGGAAAGA CACTGGAGCA AAGCCGCGAC CTAATTTATA GCACCATTAA ATCAAGTCAC
GAACGTGGGG TTCGTGCCCT GCTCATAAAA CATGGAACCG GTGAAAATAG CAAGCCTTTT
CCAGCACTCA AGAAAAGCTA TGTCAATCAC TGGCTAAGAG AGCTAGATGA AGTGATTGCA
TTTCATACCG CACAGCCTAT GCATGGCGGA TTTGGTGCTA CTTATGTGTT GCTGAAAAAG
CACCCTCAGC AAAAACTGAT TAACCGAGAA AAAAATAAGA AAGGATAA
 
Protein sequence
MSHFENDDID SFFAEMQDVK PITSDDKALL HDPEKALAEK QKRAALKLSV RDKLANPLSM 
DGVKPIPPDD FIHFQQPGIQ DGVFKKLRLG KYPLETNLTL SGKTLEQSRD LIYSTIKSSH
ERGVRALLIK HGTGENSKPF PALKKSYVNH WLRELDEVIA FHTAQPMHGG FGATYVLLKK
HPQQKLINRE KNKKG