Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01397 |
Symbol | |
ID | 6779222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 1499938 |
End bp | 1500525 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642754834 |
Product | Smr domain (Small MutS Related) containing protein |
Protein accession | YP_002125705 |
Protein GI | 196156216 |
COG category | [S] Function unknown |
COG ID | [COG2840] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.597905 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCACT TTGAAAACGA CGATATCGAT TCGTTTTTTG CTGAAATGCA AGATGTAAAA CCTATTACTT CAGATGACAA GGCTTTATTA CACGACCCTG AAAAGGCGCT CGCCGAAAAA CAAAAGCGAG CAGCCTTGAA GTTAAGCGTT CGCGACAAAC TCGCTAATCC ACTGAGCATG GATGGTGTAA AGCCAATACC GCCTGATGAC TTTATACATT TCCAGCAGCC AGGCATACAA GATGGTGTGT TTAAAAAACT GCGTCTTGGT AAATATCCGT TGGAAACCAA CCTAACGCTA TCAGGAAAGA CACTGGAGCA AAGCCGCGAC CTAATTTATA GCACCATTAA ATCAAGTCAC GAACGTGGGG TTCGTGCCCT GCTCATAAAA CATGGAACCG GTGAAAATAG CAAGCCTTTT CCAGCACTCA AGAAAAGCTA TGTCAATCAC TGGCTAAGAG AGCTAGATGA AGTGATTGCA TTTCATACCG CACAGCCTAT GCATGGCGGA TTTGGTGCTA CTTATGTGTT GCTGAAAAAG CACCCTCAGC AAAAACTGAT TAACCGAGAA AAAAATAAGA AAGGATAA
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Protein sequence | MSHFENDDID SFFAEMQDVK PITSDDKALL HDPEKALAEK QKRAALKLSV RDKLANPLSM DGVKPIPPDD FIHFQQPGIQ DGVFKKLRLG KYPLETNLTL SGKTLEQSRD LIYSTIKSSH ERGVRALLIK HGTGENSKPF PALKKSYVNH WLRELDEVIA FHTAQPMHGG FGATYVLLKK HPQQKLINRE KNKKG
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