| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01395 |
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| Symbol | |
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| ID | 6776734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 1493926 |
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| End bp | 1495239 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642754832 |
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| Product | transglycosylase, SLT family protein |
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| Protein accession | YP_002125703 |
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| Protein GI | 196156214 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.192683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAACG TGCCCACTGC TCTGTCTTCG TTATTAGAAA GGGAATCTAT TCGTGTAGGC
ACGGTTTACG GTGCGGGCAC ATTTTACAAT GGTGCAGAAG GGCCGCAGGG GTTCGAATAC
GAATTACTGG CTGGTTTCGC CGATTATCTT GGGGTAACAC TCGATTTGTA CCCTTTTTAC
AGCTACGAGG TCATGCTTGA ACAACTCGAA GAAGGCAATT TAGACATCGT CGCTACCGGA
GACGCCGTTA CGCCAGCGCT AAAACGTCGT TTTGCTTATG GACCTGCCTA CCAGCGTGTA
GAGCAGGAAC TCGTGTTTCA AGCTGGCGCC ACCAGACCTA GAGACTTGGC AGAGCTAGAC
TCTCCTATTA TTGCGGTAGC AGGAAGCAGT CAGGCTCACC TTTTATCTAA TCTCTTTAAA
CGTTTAAGTG AAGAAGAGGA TGAAGCAGTT CAGACTCAAT TAATTACCAC TGAGGACTCA
GATTCAGAAG AACTACTTCA ACAGGTCGCC AACGGTGATA TTGCCTATAC GGTTGCAGAT
AGTAATCGCT TAGCCCTACA GCGCAGACGT TATCCAAATT TGGCTGTCGC ACGAACGCTT
AATGAAAATA TGCCTATGGC ATGGGCGTTG CCTTTACAAC AAGATGACTC AGTTAAAGCG
GCGTTAATTG AATATTTTGG CACAGTGCAC CAATCTGGAT GGTTTACCGT GTTAGAGGAT
AAGTACTTTG GTCATATTCG CCAGTTTGAT TATGTAGATA GCCGAGCGTT CAATTACGCC
GCAGAGTCTA CCCTTACTCA ATATAAGTCT TTATTTCAAA AGTATGCAGG CGATTTAGAT
TGGCGCCTTC TAGCCGCAAT GAGCTACCAA GAAAGCCATT GGAACAGTGA TGCGATTTCA
AGAACAGGGG TGCGGGGGCT GATGATGCTT ACATTAGCTA CCGCCAGCGA CTGGAATGTA
GACGATAGAA CCGACCCTGA ACAAAGTATT CGAGGAGGCT CGCGCTATTT CGCCAGTTTA
TTAAATAGAA TACCTGCGCG TATCAGTGAA CCAGACAGAA CCTGGATGGC GATGGCATCG
TATAATATCG GTATGGGTCA TTTAGAAGAT GCGCGCATTT TAACAGAACA ACAAGGGGGT
AACCCCGATC TTTGGGTTGA CGTTAAACGC CGCCTGCCGC AATTGCGTCA AAAAAAGTAC
TACCGCACTA CCCGCTATGG CTACGCTAGA GGCGATGAAG CATTGCAATA TGTTGAGAAC
ATTCGCCGCT ATTACGACAG CTTAGTGTGG TTAGACGAAC AAGGAAAAAT TTAA
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| Protein sequence | MPNVPTALSS LLERESIRVG TVYGAGTFYN GAEGPQGFEY ELLAGFADYL GVTLDLYPFY
SYEVMLEQLE EGNLDIVATG DAVTPALKRR FAYGPAYQRV EQELVFQAGA TRPRDLAELD
SPIIAVAGSS QAHLLSNLFK RLSEEEDEAV QTQLITTEDS DSEELLQQVA NGDIAYTVAD
SNRLALQRRR YPNLAVARTL NENMPMAWAL PLQQDDSVKA ALIEYFGTVH QSGWFTVLED
KYFGHIRQFD YVDSRAFNYA AESTLTQYKS LFQKYAGDLD WRLLAAMSYQ ESHWNSDAIS
RTGVRGLMML TLATASDWNV DDRTDPEQSI RGGSRYFASL LNRIPARISE PDRTWMAMAS
YNIGMGHLED ARILTEQQGG NPDLWVDVKR RLPQLRQKKY YRTTRYGYAR GDEALQYVEN
IRRYYDSLVW LDEQGKI
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