| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01390 |
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| Symbol | |
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| ID | 6776782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 1489092 |
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| End bp | 1489991 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 642754827 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002125698 |
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| Protein GI | 196156209 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTTT CAACATCAGT CTACGATAGC ACACAACATA ACAATTTTTA TCCTGCTGAG
AGCACGGGTA AATCACTTAC CTTTAGTGAG TTATCAGGCT TTGTAACACA GCTACTTTCA
ACACTTGAGC TTCAAGAGTT AGGTGGCGTG TATTTCCAGC AGCTTAATAT GTTACTGCCT
GTTGTAGGGT TCAGCTTATC TGATTTCGAT TCACGTTGGG TGTACGGTAA CGCAAAAATC
TCGTCTACAT TGATTGATTT GCCCCTTCAA GGCGCTAATA CCATTAATGG TGAGCAAGCC
CATGTCTACT ATTACATTAG TTCACCCCTG TCGTTATCGC AACGAGAAAG TCTGTTCCAA
CTTCATGATT TATTTGGAAA ACAAGTAAAG CACGCGTTGT CACTAACGCG CGTTCAGCAA
ATGGCAACGA AAGACATTCT TACAGGCTTA GGCAATCGCG CGGGTTTTGA ACAATCGATG
ACTAGGCAGC TAGGGTGGGC ACAAAGGCAT GACGAACCGT TCGCTCTACT GGTTATCGAT
TTAGACAATT TTAAATTCGT AAATGACAAT TTTGGTCATG GCGAAGGCGA TAAGGTCCTT
ATTCACGTTG CCTCGCACCT CTCAAATGTT CTGCGAGATG AAGATGAAGT GTTTCGTTAT
GGTGGGGATG AGTTTTGCTG CCTATTGGAT TGCCAAACGC AGCAGCAGCT TACTTGCGCA
GCGCAGCGTA TTCAAGCAAG CATCAATAGT TCAAAGTATT TATCACAGCT AGGGGTATCT
ACAAGCCTAG GCGGCGCGAT ATATCGCGAC GGCGATACCA TAAGTACGCT GTTTGACAGA
GCAGACAACG CGCTTTATCA CGTGAAAAAT TCAGGCAAAA ACAGTTATCA CGCAGCCTAG
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| Protein sequence | MDFSTSVYDS TQHNNFYPAE STGKSLTFSE LSGFVTQLLS TLELQELGGV YFQQLNMLLP
VVGFSLSDFD SRWVYGNAKI SSTLIDLPLQ GANTINGEQA HVYYYISSPL SLSQRESLFQ
LHDLFGKQVK HALSLTRVQQ MATKDILTGL GNRAGFEQSM TRQLGWAQRH DEPFALLVID
LDNFKFVNDN FGHGEGDKVL IHVASHLSNV LRDEDEVFRY GGDEFCCLLD CQTQQQLTCA
AQRIQASINS SKYLSQLGVS TSLGGAIYRD GDTISTLFDR ADNALYHVKN SGKNSYHAA
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