| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01387 |
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| Symbol | |
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| ID | 6776726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 1483073 |
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| End bp | 1486537 |
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| Gene Length | 3465 bp |
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| Protein Length | 1154 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642754824 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_002125695 |
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| Protein GI | 196156206 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATCGC CATTTATTCA TTTACGTGTT CACAGCGACT TTTCGATGAT GGACGGCCTG
AATAAGGTTA AGCCTATTCT AGGTAAAGTT GCCGCCCTTG AAATGCCAGC GGTGGCGATA
ACCGATCAAA TGAATATGTG CGGTTTGGTT AAGTTCTATT CCGAAGCACA TAATCTGGGA
ATAAAGCCCA TCATTGGTAC CGACTTTTGG GTTACCAATG AAGCGTTTGG TGATGAGCCG
TTTAGGCTTA CGCTTTTGGC GATGAACAAT GAAGGTTATA AGAATATCAC CATTCTTATT
TCTAAAGCGT ACCTTCGCGG ACATTTAGCG CACCGGGCTG TTATCGACCA AGCATGGCTA
GCCGAACACG CAGAGGGAGT AATCATACTC TCTGGCGCAC AACACGGCGA CGTGGGCGTG
GGGTTAATGA AGAATAACGC TAAGCTTTTA GACAGTGCCT TAGCATTTTA TGAGTCTTAC
TTCCCCGATC GATTTTACCT CGAGTTAATA AGAACCGGCA GACAGGGTGA AGAGGACTAC
TTGCACCATG CGGTAGAGCT CGCCGAACAG CGCGGTTTGC CCGTGGTCGC CACCAACGAG
GTGTGCTTCA TTGACCGTGA AGGTTTCGAG GCGCATGAAA TACGCGTATG TATTCATGAT
GGTTACACGT TGGACGATAA CCGTCGGCCC AAGCGTTATA GCGAACAGCA GTACCTGCGC
ACGAGTGAAG AAATGGTTGA GCTATTTAGC GATATTCCAG AAGCCATTGA AAATACGGTT
GAAATAGCAA AGCGCTGTAA CGTTACGGTA CGTCTTAACG AATACTTCCT TCCCCAGTTC
CCAACAGGTG GCATGACCAC TGAAGACTTC TTGGTTAAAG TGTCTGAAGA AGGGTTGGAA
GAGCGTCTAG AATTTCTTTT CCCCGATGAG GAAGTTCGCA AAGCTAAACG CCCAGAGTAC
GATGACCGAC TTCGCATTGA GCTTGAAGTA ATTAACCAAA TGGGTTTCCC AGGCTACTTC
CTAATCGTAA TGGAGTTCAT TCAGTGGAGT AAGGATAACG GTATTCCGGT AGGGCCAGGA
CGGGGCTCCG GTGCAGGTTC ATTGGTGGCG TACGCGCTTA AAATTACCGA CTTAGATCCG
CTAGAATTCG ACTTGCTATT CGAACGTTTC TTGAACCCAG AGCGTGTATC TATGCCCGAC
TTCGACGTCG ACTTCTGTAT GGATAGACGA GATGAAGTAA TTGACCACGT TGCCGAGCTC
TACGGGCGCC AGGCGGTATC TCAGATCATT ACCTTCGGTA CTATGGCGGC AAAAGCGGTA
GTACGTGACG TGGGTCGAGT ATTGGGTCAC CCTTATGGTT TTGTAGACAG AATTTCAAAG
CTCATACCGC CCGACCCTGG TATGACGCTA GAAAAAGCGT TTAAAGCTGA GCCACAGCTG
CCAGAAGTTT ATGAAAGCGA TGAGGAAGTG AAAGACCTTA TCGATATGGC GCGTATTCTT
GAAGGGGTTA CCCGAAACGC CGGTAAGCAC GCCGGTGGTG TTGTTATCGC GCCAACCACG
ATTACTGATT TCTCGCCGCT GTATTGTGAT GACGAAGGGA ATAACCCGGT AACCCAGTTC
GATAAGAACG ACGTTGAAAC GGCAGGCTTG GTAAAATTCG ACTTCTTAGG TCTTCGTACA
CTGACGATCA TTCAGTGGGC GATAGATATG ATCAAAGAGG GCAAGAACGT TGATGTAGAT
ATCAGCGCTA TTCCTCTTGA AGATCCTAAG AGTTTCAGAA CCCTTCAAAA CGCCGAAACC
ACTGCAGTAT TCCAGTTGGA ATCCCGCGGT ATGAAAGAGC TAATTAAACG CCTTAAGCCG
GACTGCTTTG AAGATATCAT CGCATTGGTG GCTCTATTCC GCCCAGGACC ACTGCAGTCA
GGCATGGTAG ATAACTTTAT CGACCGTAAG CACGGACGTG AAGAAATTTC TTACCCAGAC
GCTGAATATC AGCACGAATG CCTTCAAGAA ATACTAGAAC CTACCTACGG CATTATCTTG
TATCAGGAAC AGGTAATGCA GATTGCTCAG GAAATGGCAG GTTACTCACT CGGCGGCGCT
GACTTACTTC GCCGTGCAAT GGGTAAGAAA AAACCTGAAG AAATGGCGAA GCAGCGCGGT
ACCTTCGCTG AAGGTGCTAA GGGCAATAAT ATTGACCCTG ATCTGGCCAT GAAAATCTTC
GACTTGGTAG AAAAATTCGC CGGTTACGGG TTTAACAAAT CTCACTCGGC AGCATACGCG
TTGGTGTCTT ACCAAACGCT GTGGCTAAAA GTGCATTATC CGGCTGAATT TATGGCTGCG
GTAATGTCGG CGGATATGGA TAACACCGAT AAAATCGTAA CCCTTGTCGA TGAATGTGAA
CGCATGGGTA TTGAGATACT GCCGCCAGAT TTAAACGCAG GCAAATACAA ATTTACCGTT
GATAGCAAAG GTCGCATTGT TTATGGCATT GGTGCGATTA AAGGGGTAGG TGAAGGTCCG
ATTGAAGCGA TTATTGAAGC GCGCGAGATC CAAGGTGCGT TTAAAGATCT TTTCGACTTC
TGCGCGAAGG TTGATATTAA ACGTGTTAAC AAACGTGTAC TCGAAAAATT AGTGCTTGCT
GGTGCGATGG ATAATTTAGG CCCCCACCGG GCTACGCTTA TGGCGACGCT TCCCGAAGCG
CTTGCAGCGG CGGGGCAGCA TGCCAAGGCC GAGTCGTTTG GTCAGTCAGA CATGTTTGGC
CTATTAACCA CCGAGCCTGA AGAAGTACAG CAGGCCTTTG CCGACGTACC TGAGTGGCCT
GAGAAAGTGT GGCTTGAAGG CGAGAAAGAC ACACTTGGCT TGTATTTAAC AGGCCATCCT
ATCAATCAGT ATGCTGACGA GCTTCGCTAC TATACCGACG GTCGTCTGGT CGACTTAAAA
CCTACCAATA AAGACCAGCT TGCTAGTGCA GTTGGCTTGG TACTGGGCGT TCGTGTTATG
ACAAACAAAC GAGGGCGCCG CTGGGCAATA GTGACACTGG ATGATAAGAG TGCCAGAATG
GACGTGCGTT TCTTTCCAGA CATGTACGAA CAGTTCGAAA GTTTGCTAGA AACTGACAGA
ATATTGCTCA TAAAGGGACA GGTCAGCTTT GATGATTTCT CTGGGGGCAA TACAATCACC
GCCCGTGATG TAATGGACAT TGTTCAGGCA CGAGAGAAAA ACGCGAGAGC GCTGGCGATA
AATGTTGATA CCCAGCGGCT TGAACCGAAA ATAATGAGTC AGATGCAATC TATCCTGCAG
GCATTTAACG GTGGAAGTTG TCCTGTTCAG TTAGCGGTAA CCCATCCAGA CGTAGAAGTA
ACCTTAGCGT GTGGAGCAAA GTGGTACGTT ACCCCTGAAG ATCAACTTTT ACACGATCTC
AAGCAATGTT TGGGAGACAA AGCCGTTTCA ATTCTCTACC ATTAA
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| Protein sequence | MSSPFIHLRV HSDFSMMDGL NKVKPILGKV AALEMPAVAI TDQMNMCGLV KFYSEAHNLG
IKPIIGTDFW VTNEAFGDEP FRLTLLAMNN EGYKNITILI SKAYLRGHLA HRAVIDQAWL
AEHAEGVIIL SGAQHGDVGV GLMKNNAKLL DSALAFYESY FPDRFYLELI RTGRQGEEDY
LHHAVELAEQ RGLPVVATNE VCFIDREGFE AHEIRVCIHD GYTLDDNRRP KRYSEQQYLR
TSEEMVELFS DIPEAIENTV EIAKRCNVTV RLNEYFLPQF PTGGMTTEDF LVKVSEEGLE
ERLEFLFPDE EVRKAKRPEY DDRLRIELEV INQMGFPGYF LIVMEFIQWS KDNGIPVGPG
RGSGAGSLVA YALKITDLDP LEFDLLFERF LNPERVSMPD FDVDFCMDRR DEVIDHVAEL
YGRQAVSQII TFGTMAAKAV VRDVGRVLGH PYGFVDRISK LIPPDPGMTL EKAFKAEPQL
PEVYESDEEV KDLIDMARIL EGVTRNAGKH AGGVVIAPTT ITDFSPLYCD DEGNNPVTQF
DKNDVETAGL VKFDFLGLRT LTIIQWAIDM IKEGKNVDVD ISAIPLEDPK SFRTLQNAET
TAVFQLESRG MKELIKRLKP DCFEDIIALV ALFRPGPLQS GMVDNFIDRK HGREEISYPD
AEYQHECLQE ILEPTYGIIL YQEQVMQIAQ EMAGYSLGGA DLLRRAMGKK KPEEMAKQRG
TFAEGAKGNN IDPDLAMKIF DLVEKFAGYG FNKSHSAAYA LVSYQTLWLK VHYPAEFMAA
VMSADMDNTD KIVTLVDECE RMGIEILPPD LNAGKYKFTV DSKGRIVYGI GAIKGVGEGP
IEAIIEAREI QGAFKDLFDF CAKVDIKRVN KRVLEKLVLA GAMDNLGPHR ATLMATLPEA
LAAAGQHAKA ESFGQSDMFG LLTTEPEEVQ QAFADVPEWP EKVWLEGEKD TLGLYLTGHP
INQYADELRY YTDGRLVDLK PTNKDQLASA VGLVLGVRVM TNKRGRRWAI VTLDDKSARM
DVRFFPDMYE QFESLLETDR ILLIKGQVSF DDFSGGNTIT ARDVMDIVQA REKNARALAI
NVDTQRLEPK IMSQMQSILQ AFNGGSCPVQ LAVTHPDVEV TLACGAKWYV TPEDQLLHDL
KQCLGDKAVS ILYH
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