Gene MADE_01386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01386 
Symbol 
ID6776671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp1482496 
End bp1483068 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content47% 
IMG OID642754823 
Productribonuclease HII 
Protein accessionYP_002125694 
Protein GI196156205 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.00865993 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCATAAGT TAATTGCCGG CGTTGATGAA GTAGGGCGCG GACCACTGGT AGGTGATGTT 
GTTACTGCCG CGGTCATCCT TGACCCTCAA AATCCTATTG AAGGGCTCAC TGACTCAAAA 
AAGCTCAGTG AAAAAAAACG CGTCGCGCTT GCCCAAGAAA TTCGTGAAAA AGCCCTGTAC 
TGGAATATTG GTAGAGCGAG CCCCGAAGAA ATAGACAAGC TTAATATACT GCACGCTACC 
ATGCTCGCCA TGATACGCGC GGTAGAAGGC CTGCCTGTAA AGCCTGACTT TGTGCGGGTA 
GATGGTAATC GGCTGCCGGC CTGGAATTTT GATTCTGAAG CCGTGGTAAA GGGAGATAGC 
CTACACGCAG AGATTTCAGC GGCATCAATC ATTGCTAAAG TAGAGCGAGA CAACGATATG 
ATTTCGCTTC ACGAAGCCTT TCCGCAGTAC AATTTTGCGG GGCATAAGGG TTACCCCACC 
AAAGCGCATT TTGAAGCCAT TGCAGAGTAT GGCATTTTAG ATTGCTACCG TAAGAGTTTT 
AAGCCCGTTA AAGCGTTACT TGAAGAGAAA TAA
 
Protein sequence
MHKLIAGVDE VGRGPLVGDV VTAAVILDPQ NPIEGLTDSK KLSEKKRVAL AQEIREKALY 
WNIGRASPEE IDKLNILHAT MLAMIRAVEG LPVKPDFVRV DGNRLPAWNF DSEAVVKGDS 
LHAEISAASI IAKVERDNDM ISLHEAFPQY NFAGHKGYPT KAHFEAIAEY GILDCYRKSF 
KPVKALLEEK