| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01379 |
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| Symbol | |
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| ID | 6776740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 1474290 |
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| End bp | 1475477 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642754816 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_002125687 |
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| Protein GI | 196156198 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACAG TAACAGTGTT AGGGGCCACA GGCTCCATTG GTTGTAATAC ACTTGATGTT
ATAAACCGCC ACCCAGAAAA GTATCGCGTA TTTGCCATTA CGGGTAATTC GCAGCTTGAA
TTGCTTATGC AACAGGCGCA AAAATGCGCG CCTCGTTTTG TTGTGATTGC AGATGATACG
CATTATAAAG CCGCGTGTGA ACTTGCTTCT CACTACGGCG TAGACGCTGA AATACTCACA
GGCTCCCATG CCCTTGAAGA CGTATCAAGC GCGCCTGAAG TGGATGCGGT CATGGCCGCC
ATTGTCGGCG CAGCCGGATT ATTGCCCACG CTGGCCGCGG TCAAAGCAGG CAAGCGCGTT
CTGCTTGCCA ACAAAGAAGC GTTGGTGATG TCGGGGAAAC TGTTTATTGA TGCGGCAAAC
CAAAGCGGCG CAAAAATCCT TCCTATTGAT AGCGAGCACA ACGCAATTTT TCAGTGCCTA
CCCCATGATT ACGAATACGG GAATTTCACC ACCGCGGGTA TCCGTAAACT ATTGCTAACG
GGCTCAGGTG GACCATTTCG AGAGCGCCCA TTAGATAGCT TTTCATCAAT TACTATTGAT
GAGGCAAGTA CGCACCCTAA CTGGTCGATG GGAAGAAAGA TTACTATCGA CTCAGCCACC
ATGATGAACA AGGGGTTAGA GTTTATTGAA GCTTGTTGGC TGTTTGGGGC TGGTGCTGAT
GATATCGATG TGGTTATTCA CCCGCAAAGT ATCATTCATT CCATGGTGCA ATATATTGAT
GGCTCGGTTA TCGCGCAAAT GGGTAACCCG GATATGCGAA CACCGATTGC TTATGGCTTA
GCGCATCCAG CGCGCATCGA AGCGGGGGTT AAGCCCCTAG ACTTTTCAGA TATTGCTAAC
TTTAGCTTTC AAACGCCTTG TTTAAAGCGC TACCCTAATT TGAAACTGGC CATTGATGCC
TGCAAAGAAG GGCAGTGTGC AACAACACGG ATGAATGCGG CCAACGAAGT ATCGGTTGCG
GCCTTTTTAG ACGGTAAGAT TCAATTTTGT GATATTGCAA AAGTAAATGA AGCTACGCTA
AATGCCATGC CTTACGTTTC TGTTAGTTCT ATTCAGCAAA TACTTGAGCA AGATACTTTA
GCCCGAGTTA AAGCTGACGA GATTATTCGA GGTAAATTCC AATGCTAG
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| Protein sequence | MQTVTVLGAT GSIGCNTLDV INRHPEKYRV FAITGNSQLE LLMQQAQKCA PRFVVIADDT
HYKAACELAS HYGVDAEILT GSHALEDVSS APEVDAVMAA IVGAAGLLPT LAAVKAGKRV
LLANKEALVM SGKLFIDAAN QSGAKILPID SEHNAIFQCL PHDYEYGNFT TAGIRKLLLT
GSGGPFRERP LDSFSSITID EASTHPNWSM GRKITIDSAT MMNKGLEFIE ACWLFGAGAD
DIDVVIHPQS IIHSMVQYID GSVIAQMGNP DMRTPIAYGL AHPARIEAGV KPLDFSDIAN
FSFQTPCLKR YPNLKLAIDA CKEGQCATTR MNAANEVSVA AFLDGKIQFC DIAKVNEATL
NAMPYVSVSS IQQILEQDTL ARVKADEIIR GKFQC
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