Gene MADE_01368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01368 
Symbol 
ID6776784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp1465384 
End bp1466502 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content46% 
IMG OID642754805 
Productribosomal RNA large subunit methyltransferase N 
Protein accessionYP_002125676 
Protein GI196156187 
COG category[R] General function prediction only 
COG ID[COG0820] Predicted Fe-S-cluster redox enzyme 
TIGRFAM ID[TIGR00048] radical SAM enzyme, Cfr family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000522962 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAA CTAACTTATT AAACCTAAAT CGCGAAGGCT TGCGCAATTT CTTCAAGGAA 
ATGGGCGAGA AGCCGTTTCG TGCCGATCAG GTAATGAAAT GGATTTACCA GCACGGTGTT
AGCGATTTCG AGGAAATGAG TAACCTCAAT AAAAACCTTC GTGCCATGCT TATTGAGAAC
TGTGAAATTA AAGCACCTGA AATTGCGTAT TTTCAAGAAG CCAGTGACGG TACTATCAAG
TTCGCATTGA CCCTCGAAGG TGGACAGGAA GTGGAATCGG TTTGGATCCC CGAAACCGAT
CGCGCAACCT TGTGTGTCTC ATCACAAGTA GGTTGTGCAC TAGAGTGTAC GTTCTGCTCG
ACAGCGCAGC AGGGTTTTAA CCGAAACCTC AGCGTCAGCG AAATTATTGG TCAGGTATGG
CGTGTTGCTA CATTCCTTGG TCTGTCGAAA GACTCAAGTA AACGCCCCAT CACCAACGTG
GTAATGATGG GCATGGGTGA GCCATTACTT AACCTTAAAA ACGTTGTACC GGCTATGGAT
ATCATGCTAG ATGATTTTGG GTTTGGTTTG TCTAAACGTC GCGTAACGTT AAGTACCTCT
GGCGTGGTGC CAGCGCTTGA TATGCTGGGC GACCAAATAG ATGTAGCCCT TGCGATATCG
CTTCACGCGC CAACGGATGA ACTACGCAAC GAAATCGTGC CGGTTAATAA GAAATACAAT
ATAGAAGCAT TCTTAGCAGG CGTACGTCGT TATCTAGCGA AATCAAAGGC AAACCAGGGC
CGTGTAACGG TTGAGTACGT GATGCTTTCA AATATCAACG ACAGTACTGA ACAAGCGCAC
CAGCTGGCGA AAGTATTAAA AGATACGCCG AGTAAAATTA ATTTAATACC GTTCAACCCA
TACCCGGGGT CACCATACAC CTGCTCGAGT AACTCCCGTA TCGATAGATT CTCGAAAGTG
CTTATGGAAT ACGGGTTTAC CACGGTTGTT CGCAAGACCC GCGGCGATGA TATTGATGCT
GCGTGCGGTC AATTAGTAGG CGATGTAGTT GATAGAACGA AAAGATTGTT AAAAAAACAG
GTGAAGGGCG AAGCGATTTC GGTAAAAATG GCCCAATAA
 
Protein sequence
MAKTNLLNLN REGLRNFFKE MGEKPFRADQ VMKWIYQHGV SDFEEMSNLN KNLRAMLIEN 
CEIKAPEIAY FQEASDGTIK FALTLEGGQE VESVWIPETD RATLCVSSQV GCALECTFCS
TAQQGFNRNL SVSEIIGQVW RVATFLGLSK DSSKRPITNV VMMGMGEPLL NLKNVVPAMD
IMLDDFGFGL SKRRVTLSTS GVVPALDMLG DQIDVALAIS LHAPTDELRN EIVPVNKKYN
IEAFLAGVRR YLAKSKANQG RVTVEYVMLS NINDSTEQAH QLAKVLKDTP SKINLIPFNP
YPGSPYTCSS NSRIDRFSKV LMEYGFTTVV RKTRGDDIDA ACGQLVGDVV DRTKRLLKKQ
VKGEAISVKM AQ