Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01368 |
Symbol | |
ID | 6776784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 1465384 |
End bp | 1466502 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642754805 |
Product | ribosomal RNA large subunit methyltransferase N |
Protein accession | YP_002125676 |
Protein GI | 196156187 |
COG category | [R] General function prediction only |
COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000522962 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAA CTAACTTATT AAACCTAAAT CGCGAAGGCT TGCGCAATTT CTTCAAGGAA ATGGGCGAGA AGCCGTTTCG TGCCGATCAG GTAATGAAAT GGATTTACCA GCACGGTGTT AGCGATTTCG AGGAAATGAG TAACCTCAAT AAAAACCTTC GTGCCATGCT TATTGAGAAC TGTGAAATTA AAGCACCTGA AATTGCGTAT TTTCAAGAAG CCAGTGACGG TACTATCAAG TTCGCATTGA CCCTCGAAGG TGGACAGGAA GTGGAATCGG TTTGGATCCC CGAAACCGAT CGCGCAACCT TGTGTGTCTC ATCACAAGTA GGTTGTGCAC TAGAGTGTAC GTTCTGCTCG ACAGCGCAGC AGGGTTTTAA CCGAAACCTC AGCGTCAGCG AAATTATTGG TCAGGTATGG CGTGTTGCTA CATTCCTTGG TCTGTCGAAA GACTCAAGTA AACGCCCCAT CACCAACGTG GTAATGATGG GCATGGGTGA GCCATTACTT AACCTTAAAA ACGTTGTACC GGCTATGGAT ATCATGCTAG ATGATTTTGG GTTTGGTTTG TCTAAACGTC GCGTAACGTT AAGTACCTCT GGCGTGGTGC CAGCGCTTGA TATGCTGGGC GACCAAATAG ATGTAGCCCT TGCGATATCG CTTCACGCGC CAACGGATGA ACTACGCAAC GAAATCGTGC CGGTTAATAA GAAATACAAT ATAGAAGCAT TCTTAGCAGG CGTACGTCGT TATCTAGCGA AATCAAAGGC AAACCAGGGC CGTGTAACGG TTGAGTACGT GATGCTTTCA AATATCAACG ACAGTACTGA ACAAGCGCAC CAGCTGGCGA AAGTATTAAA AGATACGCCG AGTAAAATTA ATTTAATACC GTTCAACCCA TACCCGGGGT CACCATACAC CTGCTCGAGT AACTCCCGTA TCGATAGATT CTCGAAAGTG CTTATGGAAT ACGGGTTTAC CACGGTTGTT CGCAAGACCC GCGGCGATGA TATTGATGCT GCGTGCGGTC AATTAGTAGG CGATGTAGTT GATAGAACGA AAAGATTGTT AAAAAAACAG GTGAAGGGCG AAGCGATTTC GGTAAAAATG GCCCAATAA
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Protein sequence | MAKTNLLNLN REGLRNFFKE MGEKPFRADQ VMKWIYQHGV SDFEEMSNLN KNLRAMLIEN CEIKAPEIAY FQEASDGTIK FALTLEGGQE VESVWIPETD RATLCVSSQV GCALECTFCS TAQQGFNRNL SVSEIIGQVW RVATFLGLSK DSSKRPITNV VMMGMGEPLL NLKNVVPAMD IMLDDFGFGL SKRRVTLSTS GVVPALDMLG DQIDVALAIS LHAPTDELRN EIVPVNKKYN IEAFLAGVRR YLAKSKANQG RVTVEYVMLS NINDSTEQAH QLAKVLKDTP SKINLIPFNP YPGSPYTCSS NSRIDRFSKV LMEYGFTTVV RKTRGDDIDA ACGQLVGDVV DRTKRLLKKQ VKGEAISVKM AQ
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