| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01360 |
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| Symbol | |
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| ID | 6776955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 1459536 |
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| End bp | 1460753 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642754797 |
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| Product | Selenocysteine lyase/Cysteine desulfurase |
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| Protein accession | YP_002125668 |
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| Protein GI | 196156179 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0772728 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCTAG ACGTTGCAGC ACTTCGTGCC CAGTTTCCTA TTTTATCAAA GACGGTAGAC
GGCAAACCGC TAGTCTACCT AGATAACGCA GCGACCACGC AAAAACCGCA AGCGGTAATA
GACGCGTTGG TAGACTTTTA TACGGGCACG AACGCGAACG TGCATCGCGG TGCTCATCAC
TTGTCTGATG AAGCCACCCG TCGATATGAA AATGCACGTA GCAGCGTCGC GAGTTTCATT
AATGCCAACG CCCGCGAAGA AGTTATTTGG ACGTCGGGTA CCACTGAGGC CATTAACATC
GTGGCCAATG GCCTAGGTCA GCTTCTCGGT GAAGGTGATG AAGTGATGGT CACCGAGCTT
GAGCACCATG CTAACTTGGT TACGTGGCAA CAGGCCTGTC GTCGCGCTGG CGCTACGCTC
AACATTGTAC CTATTTTCGA TACTGGTGAG CTTGATGTAG AAGCCTTTGA TAGACTGCTT
TCAAGTAACA CCAAAATGGT CGCCTTCCCG CACGTGTCAA ATGCCTTGGG AACGGTAAAC
CCAATTAAAC TGCTAACGCA AAAAGCCAAA GCAGTAGGGG CCTGGGTTTT GGTTGATGGT
GCGCAGGGTA TAGCCCATGG CGGTGTAGAC GTACAAGACA TCGGCTGCGA CTTTTACGCA
TTTTCAGGGC ATAAGCTTTT TGGCCCAACA GGCATTGGCT GCTTGTGGGG TAAAAAAGAG
GTCCTAGAAA CCTGGCCAGT ATGGCAGGTT GGTGGCGAGA TGATCAAGGA TGTCACCTAT
CATGAAGCCA CGTGGGGCTC TTTACCTAAC CGCTTAGAAG CCGGTACACC AAATATCGCC
GGCGCTATCG GAATGGGGGC GGCAGTTGAC TGGTTTAGCG CCCTTGATGT AAACGCATTA
CACGAACATG AGCAAAAGCT GCTGGCCTAT GCCACCGAGC AGGCTGAAGC CTTTGAAGGG
ATGCGCATTA TTGGTACAGC ACCAAACAAG GTTGGCGTGT TAAGCTTTTT GCTTGAAGGT
GCGCATCCAG CCGATGTGGG CTTTATTTTA GATAGACAAG GCGTGGCTAT TCGCACAGGT
GATAACTGTG CGCAACCACT GATGAAGCGA TTCGGCATAC CGGGTACCGC TCGTGCGTCG
TTTTCAATTT ACAATACGCT TGAAGAAGTA GACAGCTTAT TTGCTGCGCT TAAAAAAGCA
AAAATGATGT TGGCCTAA
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| Protein sequence | MSLDVAALRA QFPILSKTVD GKPLVYLDNA ATTQKPQAVI DALVDFYTGT NANVHRGAHH
LSDEATRRYE NARSSVASFI NANAREEVIW TSGTTEAINI VANGLGQLLG EGDEVMVTEL
EHHANLVTWQ QACRRAGATL NIVPIFDTGE LDVEAFDRLL SSNTKMVAFP HVSNALGTVN
PIKLLTQKAK AVGAWVLVDG AQGIAHGGVD VQDIGCDFYA FSGHKLFGPT GIGCLWGKKE
VLETWPVWQV GGEMIKDVTY HEATWGSLPN RLEAGTPNIA GAIGMGAAVD WFSALDVNAL
HEHEQKLLAY ATEQAEAFEG MRIIGTAPNK VGVLSFLLEG AHPADVGFIL DRQGVAIRTG
DNCAQPLMKR FGIPGTARAS FSIYNTLEEV DSLFAALKKA KMMLA
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