Gene MADE_01349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01349 
Symbol 
ID6776746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp1447114 
End bp1447998 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content41% 
IMG OID642754786 
Productregulatory protein 
Protein accessionYP_002125657 
Protein GI196156168 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3279] Response regulator of the LytR/AlgR family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0319179 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAATA AAGCGTGGTT TCAAGCGCAT CAAAGCTCAA TATCCCTTTC CCTTCTGGGC 
CTGTATTTTT TAGTCAATGG ATTTATCAAT AGCACCACGG TACTCATGGA AGCCATGCGC
ACGCCACCGC TACCTTTTGC CCAATGGGAA CCTTTTGCTT GGGAGTATAC CAGTGCCGTT
GGCAGCTTCT GCGTGGTGAT AGCACTGGCA AAGATACTCA ACCATTTTCC TTGGCAATGG
GAACGGTTTA CTTTTAGCAT TGCGTTATAT AGTGCTGTGG GTCTGTGCTT TGCAGCCACA
CATATTATAT TTATGATTGT TAGTAGAGAA ATTATTTACG CATTAGTGGG TGGCAATTAC
CAATTCGCCA CTTCTGCAGA ACAATGGTTC TTTGAACTCA TTTATGAAAT GCGAAAAGAT
TTATGGTCTT TCATCTTTTT TGTAGTAATG ATTTGGTGTT ATCGCTATGT GGTAGCACAA
TGGTTAGGTA ACGCCAGCAA TATCGGGCTT GAGTCAGCTA AATTAGACCA GCGCAATACA
CAAAATGCTC CAGATGAAAA AGCCTTCAAG CATGAACTAT TATTGATTAA AAAAAATGGC
CATGAGTTTC TAATTAATAA GCAAGATATC AACTGGTTGG CCTCTTCGGG CAATTATGTC
AACTTACACA TTGACGATAA GGTTTACCCC ATGCGTACTA CGCTAACCTC ATTTCTAGAT
GAAAATGCTT ACTTGCCTTT TGCACGGGTC CACCGCTCTT TTGCTGTAAA CCTTAATGAT
GTTGAAAGTG TAAAGGTCGG GGACAGCGGC GATGGCGTAA TTACATTAAA AAATGGCCAT
ACTGTTAAGA TGTCACGAAG GTATAAGCTG GCTATTGATA AATAA
 
Protein sequence
MINKAWFQAH QSSISLSLLG LYFLVNGFIN STTVLMEAMR TPPLPFAQWE PFAWEYTSAV 
GSFCVVIALA KILNHFPWQW ERFTFSIALY SAVGLCFAAT HIIFMIVSRE IIYALVGGNY
QFATSAEQWF FELIYEMRKD LWSFIFFVVM IWCYRYVVAQ WLGNASNIGL ESAKLDQRNT
QNAPDEKAFK HELLLIKKNG HEFLINKQDI NWLASSGNYV NLHIDDKVYP MRTTLTSFLD
ENAYLPFARV HRSFAVNLND VESVKVGDSG DGVITLKNGH TVKMSRRYKL AIDK