| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01325 |
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| Symbol | |
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| ID | 6777387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 1422104 |
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| End bp | 1423048 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642754762 |
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| Product | transcriptional regulator, LysR family protein |
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| Protein accession | YP_002125633 |
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| Protein GI | 196156144 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0111496 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATAG CGAAGGTCGA CCTGAATTTA TTAGTGTACT TAGATGTGCT GTTGCGCGAA
GGCAGTGTGA CAAAAGCCGC AAATCAGCTA AGTATTACAC AGCCTGCAAT GAGCAACGGT
CTAAAACGCC TTCGCGACCT CTTCAAAGAC CCTTTACTCG TTCGCACTAG CGACGGAATG
ACCCCCACTA AGCGCGCCCT CGAACTGCAG CCAATTATTC GCGACGTGCT TAGCCGGCTA
GAAAGCTCTA TTCAGCCGGA AACTGACTTC GACCCGCTGA CCAGCGACAG AACCTTCCGC
ATTATGACCA GTGATTATGC AGAAAGTACG CTGCTGCTTG AGTTAGTGGG AAGGCTTGCT
GACTTGGCCC CAAACATCAC GCTAGATCTT ATTACTCCCA GCGACGTAAC GTTCCACGAT
GTAGAACAAG GGAAAGTGGA TATGGCGATT AACCGCTTCG AGGAACTTCC CTTGTCATTT
CACCAAAAAG TGATTTGGTA CGACACATTC AGTTGTGTAA TGAGTGCCGA CCACCCACTT
GTTGAAAAAT GTAACCTTGA AGGCTACTTA AGCGCTCAAC ACATTTGGGT AAGTAAAACA
GGGTTTGGTG TGGGCGTGGG TATTGACCCC AATGAAGTAC AAAAACTGGG GTGGGTTGAT
GCCGAGTTAA CTAAAATTGG AAAGCAACGT GCTATTCGTG TGTTTACACG CCACTATCAC
GCAGCCCTTC AAATTGCGAA AAAGCAAAAA CTTATTGCAA CTTTGCCAAG TAAAGCGGCC
CGTTTATTTA AACACGACCC TGATGTGGTA ATTAAAGAGC CACCTTTTGA TATACCGCCT
ATAGCCCTAA AAATGGCGTG GAGTGCTCTA CTTCACCACG ACGCAGGCCA CATTTGGTTA
CGCCGATTGA TAAGCGATGT GGCCAGCGAA ATGAACGCGG GCTAA
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| Protein sequence | MNIAKVDLNL LVYLDVLLRE GSVTKAANQL SITQPAMSNG LKRLRDLFKD PLLVRTSDGM
TPTKRALELQ PIIRDVLSRL ESSIQPETDF DPLTSDRTFR IMTSDYAEST LLLELVGRLA
DLAPNITLDL ITPSDVTFHD VEQGKVDMAI NRFEELPLSF HQKVIWYDTF SCVMSADHPL
VEKCNLEGYL SAQHIWVSKT GFGVGVGIDP NEVQKLGWVD AELTKIGKQR AIRVFTRHYH
AALQIAKKQK LIATLPSKAA RLFKHDPDVV IKEPPFDIPP IALKMAWSAL LHHDAGHIWL
RRLISDVASE MNAG
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