| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01297 |
|---|
| Symbol | |
|---|
| ID | 6775637 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 1388805 |
|---|
| End bp | 1390256 |
|---|
| Gene Length | 1452 bp |
|---|
| Protein Length | 483 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 642754734 |
|---|
| Product | Polysaccharide biosynthesis protein |
|---|
| Protein accession | YP_002125605 |
|---|
| Protein GI | 196156116 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.833887 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAACGTTC GTAATTCGGT AATACTATCT GCTATATCTC AATATCTTTT AAAGATAATT
GGCTTTGTAA ACGTAATCAT TATGGCTCGT TTATTAACTC CGGACGAGCT TGGGGTTTAT
GCCATCGCAG GAGCGGTGGT GTTAATAGCT TCAGAGTTAA AACTCATGGG GACAACAAGC
TACTTGATTA GAGAAAAAGA ACTAACAGAA GCTAAGGTAC GAAGTGGAGT AGGGCTATCT
ATTATTTTCT CTTGGGGTTT GGGCCTTTCT CTTGCTGCAT CTTCTAATTA TTTATCATTG
TTTTTTGACG AGCCGCGAGT TGCTCCCGTT TTTTACATAT TGTCACTCAA TTTTATATTT
GCACCTTTCA CAAGTGTAAC CACCTCTTTG CTTTCGAGAA ACTTGCAATT TGACAAGCTT
GTCAAAGTAA ATATCTTGAC AGAAGTCAGT CGTTTTCTTG CCTCTCTTGT TTTAGTTTTA
ATGGGGTTGG GTATTTTGGG GCTAGCATGG GGCCTTCTGT TCGGTTCATT GGTAGAAGCA
ATTCTCGTTT ATATCTTTCG CCCTTCTGCT GCTAGGTTTA TTCCTAGTTT TAAGGGCTTA
AAACCTATTT TCAAATTTGG CTTTTACTCG TCAATGACTA ACCTTCTTGC TAGGTTTGAT
GCAAATGCGC CAGATCTAGT GATCGGTAAG CTTGGAACCA CCGCACAAGT TGCGTTTTTC
TCTCGAGGTG TGGGGTTTTA TCAGTTTATC ACTACTCTCA TATCCTCTGG CGTATGGCCC
GTGGTATTAC CTTATTTGTC TGGGGTCAAC AGAGATGGTG GTAATATGAA AGAGGCGTAT
ATTCGAGCGA GCCTTTTAAT GGGTGGGGTT TGCTGGCCAA TTCTTGCTGC CGCTGGTGTC
ATGAGTTACC CAATTATTAT GCTGCTATTT GGAGAGCAGT GGTTAGACAC GGTTCCCTTA
GCCGCTATCC TATCAATTTG GGCCATTTTA CGGCTTGTTC ATAATTTTTC TCCACAACTG
CTGATGGCGG TTCACAAAGA AAGAGTTATG CTGCTTAAGC AATTAGTTCT GTTTACGCTA
ACACTAACCC TTGTATATTT CGCTTACCCT TATGGTCTCA AGTATGTGGC ATGGGCGATG
GCCTTCGTTG GCTTTGCTGA TTTTGTTGTG GGTTCAATAG CAGTCTATTT CGCGACTGGA
CTTTCGATTT TTACTTTTTC GAAAGCGATG TTTAAAAATG TCATGTTAAC CGCAATGTGC
TTTGGCGTTG CCACTGTCGG GGATTTTATA TTGGATTATC GAGCACTTCC GGCTTATTTA
AGTTTAGTTC TAATGGGACC GATTCTGGTG ATTACTTGGT TGGTAGGAGT ATGGTCGACT
AAGCACCCTT TATGGGGTGA AGTCTTACAA TTGAGTAAAC CTCTTATATT AAAAGTAGCA
AGGAAAGGTT GA
|
|---|
| Protein sequence | MNVRNSVILS AISQYLLKII GFVNVIIMAR LLTPDELGVY AIAGAVVLIA SELKLMGTTS
YLIREKELTE AKVRSGVGLS IIFSWGLGLS LAASSNYLSL FFDEPRVAPV FYILSLNFIF
APFTSVTTSL LSRNLQFDKL VKVNILTEVS RFLASLVLVL MGLGILGLAW GLLFGSLVEA
ILVYIFRPSA ARFIPSFKGL KPIFKFGFYS SMTNLLARFD ANAPDLVIGK LGTTAQVAFF
SRGVGFYQFI TTLISSGVWP VVLPYLSGVN RDGGNMKEAY IRASLLMGGV CWPILAAAGV
MSYPIIMLLF GEQWLDTVPL AAILSIWAIL RLVHNFSPQL LMAVHKERVM LLKQLVLFTL
TLTLVYFAYP YGLKYVAWAM AFVGFADFVV GSIAVYFATG LSIFTFSKAM FKNVMLTAMC
FGVATVGDFI LDYRALPAYL SLVLMGPILV ITWLVGVWST KHPLWGEVLQ LSKPLILKVA
RKG
|
|---|
| |