| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01286 |
|---|
| Symbol | |
|---|
| ID | 6777641 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 1377394 |
|---|
| End bp | 1378428 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 642754723 |
|---|
| Product | putative lipopolysaccharide modification acyltransferase |
|---|
| Protein accession | YP_002125594 |
|---|
| Protein GI | 196156105 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1835] Predicted acyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.591708 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAGTCG ACGTATTCTT TGTAATATCG GGATACCTAA TAACAGGACT GCTGTTGAAG
GAGTTAAAAG ACACCCAAGG CATCCAATTC AAATCATTCT ACAGTAAAAG AATTAAACGG
ATACTTCCCC TGTCATTGGT AGTGACTGTT AGCACTCTTT TCGTATTTAG TTTAGTTTTA
TCACCGCTCG AAACTAAAGA GCTTAGCAAG ACTGGGCTGA TAGCTTCTGT TTTTTCTAGT
AATTTATGGT TTTCCTATCT AGCAACGAGC TATTTCGGCA GCGAAAATCA CTTAAACCCA
CTCTTGCACA CATGGTCACT TGGCGTAGAA GAGCAATTCT ACTTACTATG GCCAGCTGTT
TTATTTTTAT TTTTTCAAGC ATTTGGTTTT AGGAAAGTTA AACTTTTGAT TATTATATTG
ATCATAATTT CAATATTCAT CTTCCTAACG CAATTCTCAA ACAACGTACC CCAAGCATTC
TTTTCTCCAC ATACCAGAGC ATGGCAGTTC GGCTTCGGAG CACTTATTCA TTTTTTGCCC
CAATTGAAAC CGGATTATCG TTATACCCCA TCTGCCGGAG TTGGTGCTGG GTTAACGCTT
ATAGTGTTGA CAAGCCTTCT AATAGGGCCG GAGTTTAACT CTTTTGCAGC TTACGCTATT
CCTCCTACAC TGGGTGCAAT GATGGTAATT TATTTCGGTG AAAAAAATAA CGCCTTTTCA
ACTATACTCG CATGCAGACC TCTAGTATTT ATCGGCAAAA TTTCGTTCTC CCTATATCTA
TGGCACTGGC CAGTATTGGT TTTTTTCCAG TTTAGCAATC ACTCTCTATC AAGCAGCAAC
CTTTTTCTCG CGTATACAAT TATTGCCCTT CTATCAATAG GCTCGTTTTA TTTCATTGAA
GAAACGTTCC GCCATAGTTC AATAATCAAA CAAGAACGAA CCGCCCTAAT AGCAGGGATT
TCAATTATTG CCGCAGGCTG CTTTGCTGTA AGCGATCATT TTAGACTGTC TTTTCCCTGC
GGTGCTACTC CGTAA
|
|---|
| Protein sequence | MGVDVFFVIS GYLITGLLLK ELKDTQGIQF KSFYSKRIKR ILPLSLVVTV STLFVFSLVL
SPLETKELSK TGLIASVFSS NLWFSYLATS YFGSENHLNP LLHTWSLGVE EQFYLLWPAV
LFLFFQAFGF RKVKLLIIIL IIISIFIFLT QFSNNVPQAF FSPHTRAWQF GFGALIHFLP
QLKPDYRYTP SAGVGAGLTL IVLTSLLIGP EFNSFAAYAI PPTLGAMMVI YFGEKNNAFS
TILACRPLVF IGKISFSLYL WHWPVLVFFQ FSNHSLSSSN LFLAYTIIAL LSIGSFYFIE
ETFRHSSIIK QERTALIAGI SIIAAGCFAV SDHFRLSFPC GATP
|
|---|
| |