| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01277 |
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| Symbol | |
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| ID | 6777593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 1370149 |
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| End bp | 1371480 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 642754714 |
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| Product | putative sigma-54 interacting response regulator protein |
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| Protein accession | YP_002125585 |
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| Protein GI | 196156096 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.420993 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAACCG TACTTTTAGT TGATGACGAC GCTGAGTTCA CAGAAGTTGC CTGTACCATT
ATTGAATTCT TGGGTCATGA AGTGCTTACC GCAGGAACAT TAAAAGAAGC CCGAGACTGG
TTAGAAAAAG AAACCTTCGA CCACGTATTA CTCGATTTTA TGCTACCAGA TGGTAGTGGC
GCGCATTTAT TTAATGAACT AGACGCGCTT CCTAAAAGAC CAAGAGTTAC CCTTATAACC
GGCCACCCTT CTGTCAAAAG CGTTATTAAA GGGCTGTGTG GGCCTACGGT TGACTATCTC
GTTAAACCTA TACAACGAGA AGAAATTGAG GCGGTTTTAA GTCAGAAAAA CAAACAAAAA
GCGCCTAAAG AAGAGAAGAT AGAAAAACAT TTCGATTTGC TTATCGGTGA GTCACCGATA
ATGAAAGAGC TTTATAAGTT AATTTCTCGT GTAAGTAAAA CAAGCGCAAA TGTCATGCTG
CTCGGTGAAA GTGGCGTGGG TAAAGAGGTG GTCGCCGCCG CCATTCATCG CGCTTCAGAA
AGTGAAGGCC CCTACATTGC CACAAACTGT GGTGCCTTTT CTAAAGAACT CATTGGTAGT
GAACTGTTCG GTCATGAAAA GGGCGCATTC ACTGGCGCTG TGGGTCGAAA AGAAGGGGTA
TTCGAACAAG CCGAGGGGGG AACACTCTTT CTGGATGAAA TTACTGAAAT GCCCATAGAT
ATGCAGCCAA ACCTGCTTCG CGTTTTAGAA AACAAGGTCG TGCTTCGCGT TGGCGGCACT
AAAACTATCC CCGTTAATTG TCGCGTTGTA TCTGCAACAA ACCGGACAAT GGAAGAGATT
GCGCAAAGTA AAGTGCTGCG CGAGGATATA TATTTTAGGC TTGCCGTTTT TCCTATCACT
ATCCCCCCAC TAAGAGAGCG CAAAGAAGAT ATTCCTTTGT TAGCTAAAAC GTTCATCGCT
GAATTTAATA AGGATAATGG CTCTAACTTT AGGTGGGAAG ACGCTCAACT TGATACACTT
CAAGCCTACG ATTGGCCGGG CAATGTTCGT GAATTAAGAC ACTTTGTGCA TCGTGCAGCT
ATCATGAGTG ACCCCGAAAA AAGTGAAATA GAGTTACCAA AAACCATTGA ATCGCCTTTC
GCTCAAAAGC AAAGTACGAC ACCGGCACTT CAGGCAGGAC GCACCATTGA AGACGTTGAG
AAAGAGCTTA TTTACGCCAC GCTAGAAAAG GTCAACGGCA ATAAAACAAC GGCTGCTGAA
ATGCTGGGGA TCAGTACTAA GACCCTCTAT AACCGCCTTC ACGCATATGG TGACTTAAGC
AAAGACGAAT AA
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| Protein sequence | MLTVLLVDDD AEFTEVACTI IEFLGHEVLT AGTLKEARDW LEKETFDHVL LDFMLPDGSG
AHLFNELDAL PKRPRVTLIT GHPSVKSVIK GLCGPTVDYL VKPIQREEIE AVLSQKNKQK
APKEEKIEKH FDLLIGESPI MKELYKLISR VSKTSANVML LGESGVGKEV VAAAIHRASE
SEGPYIATNC GAFSKELIGS ELFGHEKGAF TGAVGRKEGV FEQAEGGTLF LDEITEMPID
MQPNLLRVLE NKVVLRVGGT KTIPVNCRVV SATNRTMEEI AQSKVLREDI YFRLAVFPIT
IPPLRERKED IPLLAKTFIA EFNKDNGSNF RWEDAQLDTL QAYDWPGNVR ELRHFVHRAA
IMSDPEKSEI ELPKTIESPF AQKQSTTPAL QAGRTIEDVE KELIYATLEK VNGNKTTAAE
MLGISTKTLY NRLHAYGDLS KDE
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