Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01275 |
Symbol | |
ID | 6775795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 1368389 |
End bp | 1369900 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 642754712 |
Product | putative two-component sensor histidine kinase |
Protein accession | YP_002125583 |
Protein GI | 196156094 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.590202 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTCTA AAGTATTGTC TTCGATATAC AGTTGGATTG TTATCGTTGT GCTTGTTATC GTTGTGATAA CGGCAAATTC ATTTTATGTG GTAAGCACAC TAAATGACCT CTCTGCGCTT GAAGCCAGAT TGTTTACTAC AAACCGTGTT ATTAATGCCA TAAACAGGCT ACACGTAGCG GTTTTGCGCG TAGAGTCTGG ACAACGTGGC TATATGTTAA CAGACGATGA AAAATACCTG ACGGACTACA GCGAATCATT AAGTGTTATT GGCGAACTGA TGAGCGAAGT CGAAGTCAGC TCTTTTTCTT CCGATATCGA TGACCAATCC GTTAGGATTG AAGAGCTACT CGACCTTACT AAAGCGAAAG TCAATGAGGT GATTCGAGTT GTTGAACTCA TAAAAGAAGG CAATGAACAA CAAGCCATAG AATCATTAAA TAGTGATAAA GGCATTGCCC TTTATCGGCG TTTTGAAACC GTATTTAATG ATATTCACAA CTCAGAAAGA GATATGCAGG GAACACACCT TGCCAACTTG ATGAGTTTAA GACGTGATTC TGTAAATACG CTGATTATTT CATCAGCGAC AACGCTTCTT CTCATAATCA CCGTATTTTT ATTATTAAAA ATTAACTCCC GTGAGCATGA AAAGTATCAA GCTGACCTTG AGTCTGTAAA TGAAGATTTG GAGTCGCGGA TTGTAGAGCG TACTCAGGAA CTCAGCGTTT ACTCTGACGA ACTTGCCAGA AGTAATAGAG AGCTTGAAGA CTTCGCTTTT GTCGCCTCTC ACGATCTTCA GGAGCCGCTG CGAAAAATCA GGGCGTTCGG CAATAGGTTA GAATCCGGCT ACAACGACGT GATTGACGAG AGGGGCAAAG ATTACCTTGC TCGCATGCTT AATGCGGCTG AGCGTATGTC TATGCTTATC TCTGATCTTC TGGCTTTTTC TCGAGTATCA ACCCGAGGTA GAGAGTTTGA AGAAGTTAAC CTAGATCGGG TTATAAAAAG CGTACTTGGA GATTTAGAGA TAGCCATTGA AGAAAAGTCG GCGCAGATAA ACGTTTGCGA AATGCCAACA ATTCGAGGGG ACAAGTCCCA ACTCGAACAG CTCTTTTTGA ACCTCATCTC TAATGCGCTT AAATTTCAAA GCGAAGGCGT GGTGCCCATC GTCAATATAA CCGTTACTGA TGCGACGGAA GAAGATTTGA AAGATATATT GATGCATGAG GAAAACGAAT GGATAAAAAT AGCGATATCT GACAACGGTA TTGGTTTCGA ACAGTCTTTT GCAGAAAAAA TATTTGCTCC TTTTCAGCGT CTGCATGGTA GAAGTGAGTA CAAAGGTACC GGCATTGGAC TTGCCGTTTG CCGACGCATT GTTGAACGAC ACAATGGCCA CATAACCGCG AAAAGCACCC CCGGGGAAGG GGCAACGTTC TTGATGATTA TGCCTAAAGA TAGCGATCCT TTTTCAAACA ATAATAATGG AGATACACAC AATGACGCGT AA
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Protein sequence | MISKVLSSIY SWIVIVVLVI VVITANSFYV VSTLNDLSAL EARLFTTNRV INAINRLHVA VLRVESGQRG YMLTDDEKYL TDYSESLSVI GELMSEVEVS SFSSDIDDQS VRIEELLDLT KAKVNEVIRV VELIKEGNEQ QAIESLNSDK GIALYRRFET VFNDIHNSER DMQGTHLANL MSLRRDSVNT LIISSATTLL LIITVFLLLK INSREHEKYQ ADLESVNEDL ESRIVERTQE LSVYSDELAR SNRELEDFAF VASHDLQEPL RKIRAFGNRL ESGYNDVIDE RGKDYLARML NAAERMSMLI SDLLAFSRVS TRGREFEEVN LDRVIKSVLG DLEIAIEEKS AQINVCEMPT IRGDKSQLEQ LFLNLISNAL KFQSEGVVPI VNITVTDATE EDLKDILMHE ENEWIKIAIS DNGIGFEQSF AEKIFAPFQR LHGRSEYKGT GIGLAVCRRI VERHNGHITA KSTPGEGATF LMIMPKDSDP FSNNNNGDTH NDA
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