Gene MADE_01275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01275 
Symbol 
ID6775795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp1368389 
End bp1369900 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content42% 
IMG OID642754712 
Productputative two-component sensor histidine kinase 
Protein accessionYP_002125583 
Protein GI196156094 
COG category[T] Signal transduction mechanisms 
COG ID[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.590202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTCTA AAGTATTGTC TTCGATATAC AGTTGGATTG TTATCGTTGT GCTTGTTATC 
GTTGTGATAA CGGCAAATTC ATTTTATGTG GTAAGCACAC TAAATGACCT CTCTGCGCTT
GAAGCCAGAT TGTTTACTAC AAACCGTGTT ATTAATGCCA TAAACAGGCT ACACGTAGCG
GTTTTGCGCG TAGAGTCTGG ACAACGTGGC TATATGTTAA CAGACGATGA AAAATACCTG
ACGGACTACA GCGAATCATT AAGTGTTATT GGCGAACTGA TGAGCGAAGT CGAAGTCAGC
TCTTTTTCTT CCGATATCGA TGACCAATCC GTTAGGATTG AAGAGCTACT CGACCTTACT
AAAGCGAAAG TCAATGAGGT GATTCGAGTT GTTGAACTCA TAAAAGAAGG CAATGAACAA
CAAGCCATAG AATCATTAAA TAGTGATAAA GGCATTGCCC TTTATCGGCG TTTTGAAACC
GTATTTAATG ATATTCACAA CTCAGAAAGA GATATGCAGG GAACACACCT TGCCAACTTG
ATGAGTTTAA GACGTGATTC TGTAAATACG CTGATTATTT CATCAGCGAC AACGCTTCTT
CTCATAATCA CCGTATTTTT ATTATTAAAA ATTAACTCCC GTGAGCATGA AAAGTATCAA
GCTGACCTTG AGTCTGTAAA TGAAGATTTG GAGTCGCGGA TTGTAGAGCG TACTCAGGAA
CTCAGCGTTT ACTCTGACGA ACTTGCCAGA AGTAATAGAG AGCTTGAAGA CTTCGCTTTT
GTCGCCTCTC ACGATCTTCA GGAGCCGCTG CGAAAAATCA GGGCGTTCGG CAATAGGTTA
GAATCCGGCT ACAACGACGT GATTGACGAG AGGGGCAAAG ATTACCTTGC TCGCATGCTT
AATGCGGCTG AGCGTATGTC TATGCTTATC TCTGATCTTC TGGCTTTTTC TCGAGTATCA
ACCCGAGGTA GAGAGTTTGA AGAAGTTAAC CTAGATCGGG TTATAAAAAG CGTACTTGGA
GATTTAGAGA TAGCCATTGA AGAAAAGTCG GCGCAGATAA ACGTTTGCGA AATGCCAACA
ATTCGAGGGG ACAAGTCCCA ACTCGAACAG CTCTTTTTGA ACCTCATCTC TAATGCGCTT
AAATTTCAAA GCGAAGGCGT GGTGCCCATC GTCAATATAA CCGTTACTGA TGCGACGGAA
GAAGATTTGA AAGATATATT GATGCATGAG GAAAACGAAT GGATAAAAAT AGCGATATCT
GACAACGGTA TTGGTTTCGA ACAGTCTTTT GCAGAAAAAA TATTTGCTCC TTTTCAGCGT
CTGCATGGTA GAAGTGAGTA CAAAGGTACC GGCATTGGAC TTGCCGTTTG CCGACGCATT
GTTGAACGAC ACAATGGCCA CATAACCGCG AAAAGCACCC CCGGGGAAGG GGCAACGTTC
TTGATGATTA TGCCTAAAGA TAGCGATCCT TTTTCAAACA ATAATAATGG AGATACACAC
AATGACGCGT AA
 
Protein sequence
MISKVLSSIY SWIVIVVLVI VVITANSFYV VSTLNDLSAL EARLFTTNRV INAINRLHVA 
VLRVESGQRG YMLTDDEKYL TDYSESLSVI GELMSEVEVS SFSSDIDDQS VRIEELLDLT
KAKVNEVIRV VELIKEGNEQ QAIESLNSDK GIALYRRFET VFNDIHNSER DMQGTHLANL
MSLRRDSVNT LIISSATTLL LIITVFLLLK INSREHEKYQ ADLESVNEDL ESRIVERTQE
LSVYSDELAR SNRELEDFAF VASHDLQEPL RKIRAFGNRL ESGYNDVIDE RGKDYLARML
NAAERMSMLI SDLLAFSRVS TRGREFEEVN LDRVIKSVLG DLEIAIEEKS AQINVCEMPT
IRGDKSQLEQ LFLNLISNAL KFQSEGVVPI VNITVTDATE EDLKDILMHE ENEWIKIAIS
DNGIGFEQSF AEKIFAPFQR LHGRSEYKGT GIGLAVCRRI VERHNGHITA KSTPGEGATF
LMIMPKDSDP FSNNNNGDTH NDA