| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01260 |
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| Symbol | |
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| ID | 6778015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 1356824 |
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| End bp | 1358455 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642754697 |
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| Product | Na(+)-linked D-alanine glycine permease |
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| Protein accession | YP_002125568 |
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| Protein GI | 196156079 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.291122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGATG GTTTCTTAGG GGGGGCGTTC TGGTTCCCTT ATGTGCTGTT AGGTGTAGGT
CTTTTCTTCA CAGTTTATCT CAAGTTTCCG CAAATTCGTT TCTTCAAACA CGCCTGGCAA
GTAGTTACCG GTAAGTTTGA TAAAGAAAGT GATCCAGGCG ATACCACGCA TTTTCGTGCC
TTAACCACGG CGCTGTCTGG CACCGTAGGG ACGGGTAATA TTTCAGGTGT GGCCTTTGCT
ATCTTCTTAG GTGGCCCAGC AGCGTTATTT TGGATGTGGG TTACCGCCTT TTTAGGTATG
ACAACGAAAT TTGTTGAAGT GACCCTTTCG CACAAGTACC GCGTTAAAAC GGAAGATGGT
ACCATGGCGG GTGGGCCCAT GTACTATATG GACCGACGCC TAAACATGAA GTGGCTAGCT
GTTGCTTTCG CGATTGCTAC GGTAGTGAGC TCATTCGGTA CAGGTAACCT TCCGCAAAGT
AACGGCATTG CACAAAGTAT CGAAGCGACT TTTGGCTTTG AACCTTGGGC GGTAGGCAGT
GTACTTGGTA TTCTTCTGGC CTTGGTTATT CTTGGCGGTA TTCAGCGAAT TGCGGCGTTT
ACTGCTCGTG TAGTGCCGGT AATGGCGGTG ATTTACCTTA TTGGTGCACT CGCGGTTATC
TTCGCAAACC TTGAAAACAT CGGGCCGTCG TTTGCTGCGG TTATCGGTGA TGCTTTCACT
GGCTCTGCGG CTGCGGGAGG GTTTTTAGGG GCCTCGCTTG CTTATGCATT TAACCGAGGT
GTAAACCGAG GTCTATTCTC AAACGAAGCC GGCCAAGGTT CTGCACCTAT TGCACACGCT
GCAGCAAAAA CAAAAGAGCC AGCGTCAGAG GGGATGGTGT CATTGCTTGA ACCTTTCATC
GATACCATTC TTATTTGTAC AGTGACAGGT TTAGTTATCC TGTCGTCGGG TGTTTGGAAA
GAAAAACATG AGAACGTGTT TGACCGTTCT GACATGTATT TCGTTGCCGG CCAGTATGAC
GACACGAACC AAGCGGATGT CGATAAACTT TATGGCTACC TCAATGAGGT TGAAGGCAAT
GTGGTTGAGC CTTACACCGG CTCTATTACG GTTGTTAACG GCACCGCAGT CAGTGACGGT
TTCACACTAC TTAACGCGCG CTCAATTGCT GAAGATGTTA AGTACGCGGT GGGAAGTGAA
GATCTGTTTA CAGGTACGCT AAAAGTTGTA GACGGTAAGC CAGTAAAAGA GAATTTAGAA
GTAAGTGGTA AGTCGCTGGT TCACTCTGCG GCATTGACAA CCATTGCGTT TACCCGAGGC
TTCTTCGGTG ACGCGGGTCA ATACATTGTT TCTATTGGTC TAATGCTGTT TGCTTTCTCT
ACCGCTATCG CGTGGTCTTA CTACGGCGAC CGTGCCATGA CATACCTTTT AGGGCCGCGC
TCAGTGATGC CTTATCGCGT TATTTACGTA GCCGGTTTTG TATGGGCAGC GTTCTCTGAT
ACGACTCTAG TATGGGCACT TTCTGCAGTG GCAATTGTCG TTATGACCCT GCCGAACTTA
TTCGGTATTA TGCTGCTTTG CAAAGAAATG AAAGAGACCG TGAACGACTA CTGGGCTCGC
CATAAAAAGT AA
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| Protein sequence | MLDGFLGGAF WFPYVLLGVG LFFTVYLKFP QIRFFKHAWQ VVTGKFDKES DPGDTTHFRA
LTTALSGTVG TGNISGVAFA IFLGGPAALF WMWVTAFLGM TTKFVEVTLS HKYRVKTEDG
TMAGGPMYYM DRRLNMKWLA VAFAIATVVS SFGTGNLPQS NGIAQSIEAT FGFEPWAVGS
VLGILLALVI LGGIQRIAAF TARVVPVMAV IYLIGALAVI FANLENIGPS FAAVIGDAFT
GSAAAGGFLG ASLAYAFNRG VNRGLFSNEA GQGSAPIAHA AAKTKEPASE GMVSLLEPFI
DTILICTVTG LVILSSGVWK EKHENVFDRS DMYFVAGQYD DTNQADVDKL YGYLNEVEGN
VVEPYTGSIT VVNGTAVSDG FTLLNARSIA EDVKYAVGSE DLFTGTLKVV DGKPVKENLE
VSGKSLVHSA ALTTIAFTRG FFGDAGQYIV SIGLMLFAFS TAIAWSYYGD RAMTYLLGPR
SVMPYRVIYV AGFVWAAFSD TTLVWALSAV AIVVMTLPNL FGIMLLCKEM KETVNDYWAR
HKK
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