| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01256 |
|---|
| Symbol | |
|---|
| ID | 6776577 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 1352224 |
|---|
| End bp | 1352652 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 642754693 |
|---|
| Product | methionine sulfoxide reductase B |
|---|
| Protein accession | YP_002125564 |
|---|
| Protein GI | 196156075 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
|---|
| TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.779389 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACAG ATAAAAAACA AGACGAATCC ATTGCTGAAA AAGATTGGAA AGTTGAATTA
AGCGAACAGG AGTACTATGT ATGCCGCGAA GCGGGAACTG AACGTCCGTT TACCGGTGTA
TTGCTTGATG AACAGCGAGA TGGGCTGTAT GTATGCAAGT GCTGTGAAGC CCCGCTGTTT
CCCTCAGATA CGAAGTTTGA TGCAGGCTGT GGATGGCCTT CTTTCTATAA ACAGCTTGAT
GATGGAAATG TAGATTATAG AGAAGATGTG TCTCACGGTA TGCGTCGTGT TGAGATTTTC
TGTAAGCAAT GTGGCTCGCA CCTCGGCCAT GTTTTCCCTG ATGGCCCAGC ACCTACAGGG
CAACGCTATT GCGTAAACTC TCTATCTATG ACGTTTAAAG GGGAAGATAA CGTTGAGGTT
AAAGGGTGA
|
|---|
| Protein sequence | MSTDKKQDES IAEKDWKVEL SEQEYYVCRE AGTERPFTGV LLDEQRDGLY VCKCCEAPLF
PSDTKFDAGC GWPSFYKQLD DGNVDYREDV SHGMRRVEIF CKQCGSHLGH VFPDGPAPTG
QRYCVNSLSM TFKGEDNVEV KG
|
|---|
| |