Gene MADE_01250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01250 
Symbol 
ID6777972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand- 
Start bp1342332 
End bp1343327 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content46% 
IMG OID642754687 
Productglyceraldehyde-3-phosphate dehydrogenase 
Protein accessionYP_002125558 
Protein GI196156069 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAATTC GCATCGGTAT CAATGGTTTT GGCCGTATTG GTCGCCTAGT AATGCGTGCA 
GCAGCAGAGC GCAACGACAT CGAAGTTGTA GCTATTAACG ACTTGCTAGA CACAGACTAC 
ATTGCTTATC TATTGAAGTA CGACTCGACT CACGGTTTAT TCGACGGTGA AGTAACAGTA 
GATAACAATA ACCTAGTTGT AAACGGTAAA ACTATCCGTA TTACATCTGA AAGAGATCCA 
GCGGCACTTA AGTGGAATGA AGTTGACGTA GACGTGGTTG TTGAATCAAC AGGTCTGTTC 
CTGACTAAAG AAACAGCAGC TAAGCACATC GAAGCGGGCG CGAAGAAAGT AGTAATGTCT 
GCGCCTTCTA AAGATGATAC GCCAATGTTT GTTATGGGCG TTAACCAAGA AAGCTACGCT 
GGCGAAACTA TCGTTTCTAA TGCGTCGTGC ACCACTAACT GCCTTGCACC GCTAGCGAAA 
GTACTAAACG ACAAGTTTGG TATTGTTGAT GGTCTTATGA CAACGGTTCA CGCGACTACA 
GCAACGCAGA AAACGGTAGA CGGTCCTTCA ATGAAAGACT GGCGTGGTGG CCGCGGTGCG 
GGTCAAAACA TCATTCCGTC ATCAACGGGT GCAGCAAAAG CAGTAGGTAA AGTAATTCCT 
GAGCTTAATG GCAAACTAAC AGGCATGGCT TTCCGCGTAC CTACGCCAAA CGTTTCAGTG 
GTTGACCTTA CTGTTAACCT AGCAAAAGCG GCGAGCTACG ATGAAATCTG CGCGGCGATG 
AAAGACGCAT CAGAAGGCGA GCTTAAAGGT ATCATGGGCT ACACCGAAGA CGCTGTTGTA 
TCGAATGACT TTGTAGGCGA TGCACGTACG TCAGTATTCG ATGCTACAGC CGGTATCGCG 
CTAACAGACA CTTTCGTTAA GTTAGTGTCT TGGTACGACA ACGAATGGGG CTACTCAAAC 
AAGGTTCTAG ACCTTGTAGC GCACATTTCC AAATAA
 
Protein sequence
MTIRIGINGF GRIGRLVMRA AAERNDIEVV AINDLLDTDY IAYLLKYDST HGLFDGEVTV 
DNNNLVVNGK TIRITSERDP AALKWNEVDV DVVVESTGLF LTKETAAKHI EAGAKKVVMS 
APSKDDTPMF VMGVNQESYA GETIVSNASC TTNCLAPLAK VLNDKFGIVD GLMTTVHATT 
ATQKTVDGPS MKDWRGGRGA GQNIIPSSTG AAKAVGKVIP ELNGKLTGMA FRVPTPNVSV 
VDLTVNLAKA ASYDEICAAM KDASEGELKG IMGYTEDAVV SNDFVGDART SVFDATAGIA 
LTDTFVKLVS WYDNEWGYSN KVLDLVAHIS K