Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01249 |
Symbol | |
ID | 6777956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 1341257 |
End bp | 1342108 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642754686 |
Product | uncharacterized aldose 1-epimerase-like protein |
Protein accession | YP_002125557 |
Protein GI | 196156068 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0676] Uncharacterized enzymes related to aldose 1-epimerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.711038 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCACCCG TTAGTTCAGT CACTGTTAGC GAGTCTAATG GACTTACCTT TTTAGATGTC GATAACGCAT TAGCCACGGC GCGAATAAGC CTGTTTGGCG GCCATATCTT GTCTTATGTA CCTAAAAGCG ATGATAAAGA ACGCCTTTGG GTCAGCCCTC ACGCCTATTT AAACGGAGAG CGGCCAATTC GCGGCGGTAT TCCCGTTTGC TGGCCGTGGT TCAGTGACGA CCACGGGCGG GAAAAAGGTG CCCTTCCCTC CCATGGCTTT TTAAGAACCC AAGTGTGGAA GTTGATTGAT TCAAAAGACG ACGATAGCGG CACAACCATC GAATTGTCAC CAAGCTTTAC ACGGGCAGAT GGCTTTGAAA ATGAGTGTAA CGTGTCCATG GTGATCAAGG TGGGCAATAC AATGGACATC TCTTTAATTA CTGAAAATAC CGGCGTGGCA CCTTTCGAAT TTAACTGTGC GCTTCACACT TATTTCCATG TTGACCATAT TCAACATACG CTAATTAGTG GTATTGAAGG CCAGTACAAA GATAAACTGG ATAACTGGGC GTTAAAAGCA ACACCCACCC CTTACGCCAT TACCGGTGAA ACTGACCGCA TTCACTTAGC GCCAATCAAA ACGGCCGACA TTGAAGTGGA CGGTAATGCT TTTACTCAAG TCGTTTCTGA GGGTAATGAC TCACTTGTAG TATGGAACCC ATGGCAAAGT GCCGCCTCTA TTTCAGACAT GGACCCGTTT GGTTACAAGC ATATGCTGTG CGTAGAGACA TCATTAACGC AAGGGAAAAC GTTAGCACCT AGCGAGTGCC ACACGCTGAA ACAAACTATC GTTCCACGAT AA
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Protein sequence | MPPVSSVTVS ESNGLTFLDV DNALATARIS LFGGHILSYV PKSDDKERLW VSPHAYLNGE RPIRGGIPVC WPWFSDDHGR EKGALPSHGF LRTQVWKLID SKDDDSGTTI ELSPSFTRAD GFENECNVSM VIKVGNTMDI SLITENTGVA PFEFNCALHT YFHVDHIQHT LISGIEGQYK DKLDNWALKA TPTPYAITGE TDRIHLAPIK TADIEVDGNA FTQVVSEGND SLVVWNPWQS AASISDMDPF GYKHMLCVET SLTQGKTLAP SECHTLKQTI VPR
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