Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01241 |
Symbol | |
ID | 6777608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 1331589 |
End bp | 1332344 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642754678 |
Product | putative MTA/SAH nucleosidase |
Protein accession | YP_002125549 |
Protein GI | 196156060 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0775] Nucleoside phosphorylase |
TIGRFAM ID | [TIGR01704] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.214257 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATACAAG GCCCTATGCC CATAGAAGCG GAATATTTCG CCGCGCTTTT AGACAATGTA AACATTGAGT ATTCGGGCAA TGCCGTATTC TACCGAGGTA CATTAGACGG CTACCCTATC GTCGTGGCGA AAACCGGCAA AGGACTTGAA AATACGGCAG CCGCCACAGC AATAGGTATA GAAAGATACC GTCCACGTCT TATCATTAAC CAAGGTACAT CAGGTGGTCA TGACCCAGAT TTAAACGTAG GCGATATAGT CCTTGGCGAA CGCAGCGTGA ACGCATCAAA CTTTAAAACC CAAAAACTTG CTAAGGGTGA AGGTTCAAAG CCATTTCAAT GGCTACCTAT GGATCTTATG GCCTCAGAGA AAAGTGCTGG TGAAGGCAGT AGCGCGAAAG ACGCTGAAAA GCTACGATTT TACCTTGGTG ATAAGACGCT GATTGCGCTG GCTTCATCAC TTTCTTCGTC ATATAAACGG GGTAAGGTTG TGACAGGTAC TATTGGCAGC GGCAACTTTT GGAATAACGA GATAGACAGA ATAGCTTGGT TACACAAAAA TATGGGCACT AGTGTTGAAG AGATGGAAAC CTCTGCAGCC GCGCAAATTG CCCATGCATA CCACACACCG TTTTTAGGTA TCCGCGTGTT ATCAAATAAT ATTACTAATC ACGGTGAATA TGACCCCACT ACAGCGAAAG ATTGCCAAGC GTTTGTCGCT GACGTGGTAA AAGCGTACAT CAAGTCGTTA AATTAA
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Protein sequence | MIQGPMPIEA EYFAALLDNV NIEYSGNAVF YRGTLDGYPI VVAKTGKGLE NTAAATAIGI ERYRPRLIIN QGTSGGHDPD LNVGDIVLGE RSVNASNFKT QKLAKGEGSK PFQWLPMDLM ASEKSAGEGS SAKDAEKLRF YLGDKTLIAL ASSLSSSYKR GKVVTGTIGS GNFWNNEIDR IAWLHKNMGT SVEEMETSAA AQIAHAYHTP FLGIRVLSNN ITNHGEYDPT TAKDCQAFVA DVVKAYIKSL N
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