Gene MADE_01235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01235 
Symbol 
ID6777761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp1327038 
End bp1328015 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content42% 
IMG OID642754672 
ProductEndonuclease/exonuclease/phosphatase 
Protein accessionYP_002125543 
Protein GI196156054 
COG category[S] Function unknown 
COG ID[COG3021] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.201786 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATTG CGCTCATTAT CGCATCGCTA CTCTTTATAA TAGTCAGCTT TACCCCGTTA 
CTTCCTTCTT CCCACTGGTT AGTTAGAGTG TGGGAATTTC CGCGTCTTCA AATTTCCGTT
ATTATAGGTT TCCTGCTTAT ATGCCACGTG GTTAATTGGC CTTCTACCAA TATTCCTTTT
TTCGTTAACG CACTCGCCGT AGGTGGCTTA ACAATAAGCC TTGTTTACCA AATTATCTGG
ATTATTCCCT ACACGCCGTT TTACAAGCGT GAAGTTACTA GAATAAAAAA CGCGAAACCA
CAAGACACCC TCAGCGTGTT GTCTAGCAAC GTGTATATGC CCAATAATGA TTTTCGTAAA
CTTATTGAGC ATGTTAGAAA TAAGCAGCCT GATTTTTTGG TTACGCTAGA ATCCAACGAG
AAGTGGCAAA AAGGGATTAG CGAAATTGAA TCGGAATACC CTTATCGAAA ATTTTGTGCG
TTAGAAAACC TCTATGGCAT GCACTTATAC AGTAAGATCC CTTTTGAAGA GGCCACATTG
AACTTCTTGA TTGAAGATGA TGTACCGTCA ATGAAAGTGA AAATAAAGCA CAAAGGTAAA
GATGCGTTAC TCTATTTTCT TCATCCGAAA CCGCCTAGCC CTACAGAAAA TACTTACGCG
AAGCCGCGGG ACATTGAGTT AACGGTAGTG GGCGAAGAAA TAGCTAAAAC AGAAGGGCCG
ATAATTGTAG CGGGCGACCT TAACGACGTA GCCTGGTCTC CTACCACCCG TAAATTTAAA
AAAATTAGCG GGCTATTAGA CCCAAGAGAG GGGCGTGGCT TTTATAATAC ATTCCACGCT
AAGTACCCGT TAGTAAAATG GCCCCTTGAC CATGTATTTC ACTCTAGGCA CTTTGCGCTC
GTTCATATTG AAAAATTAGA GGGCATTGGC TCTGACCATT ACCCTTTATA CACGGAGCTC
GCGTTTATTG AACAGTAA
 
Protein sequence
MDIALIIASL LFIIVSFTPL LPSSHWLVRV WEFPRLQISV IIGFLLICHV VNWPSTNIPF 
FVNALAVGGL TISLVYQIIW IIPYTPFYKR EVTRIKNAKP QDTLSVLSSN VYMPNNDFRK
LIEHVRNKQP DFLVTLESNE KWQKGISEIE SEYPYRKFCA LENLYGMHLY SKIPFEEATL
NFLIEDDVPS MKVKIKHKGK DALLYFLHPK PPSPTENTYA KPRDIELTVV GEEIAKTEGP
IIVAGDLNDV AWSPTTRKFK KISGLLDPRE GRGFYNTFHA KYPLVKWPLD HVFHSRHFAL
VHIEKLEGIG SDHYPLYTEL AFIEQ