Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01235 |
Symbol | |
ID | 6777761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 1327038 |
End bp | 1328015 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 642754672 |
Product | Endonuclease/exonuclease/phosphatase |
Protein accession | YP_002125543 |
Protein GI | 196156054 |
COG category | [S] Function unknown |
COG ID | [COG3021] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.201786 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATATTG CGCTCATTAT CGCATCGCTA CTCTTTATAA TAGTCAGCTT TACCCCGTTA CTTCCTTCTT CCCACTGGTT AGTTAGAGTG TGGGAATTTC CGCGTCTTCA AATTTCCGTT ATTATAGGTT TCCTGCTTAT ATGCCACGTG GTTAATTGGC CTTCTACCAA TATTCCTTTT TTCGTTAACG CACTCGCCGT AGGTGGCTTA ACAATAAGCC TTGTTTACCA AATTATCTGG ATTATTCCCT ACACGCCGTT TTACAAGCGT GAAGTTACTA GAATAAAAAA CGCGAAACCA CAAGACACCC TCAGCGTGTT GTCTAGCAAC GTGTATATGC CCAATAATGA TTTTCGTAAA CTTATTGAGC ATGTTAGAAA TAAGCAGCCT GATTTTTTGG TTACGCTAGA ATCCAACGAG AAGTGGCAAA AAGGGATTAG CGAAATTGAA TCGGAATACC CTTATCGAAA ATTTTGTGCG TTAGAAAACC TCTATGGCAT GCACTTATAC AGTAAGATCC CTTTTGAAGA GGCCACATTG AACTTCTTGA TTGAAGATGA TGTACCGTCA ATGAAAGTGA AAATAAAGCA CAAAGGTAAA GATGCGTTAC TCTATTTTCT TCATCCGAAA CCGCCTAGCC CTACAGAAAA TACTTACGCG AAGCCGCGGG ACATTGAGTT AACGGTAGTG GGCGAAGAAA TAGCTAAAAC AGAAGGGCCG ATAATTGTAG CGGGCGACCT TAACGACGTA GCCTGGTCTC CTACCACCCG TAAATTTAAA AAAATTAGCG GGCTATTAGA CCCAAGAGAG GGGCGTGGCT TTTATAATAC ATTCCACGCT AAGTACCCGT TAGTAAAATG GCCCCTTGAC CATGTATTTC ACTCTAGGCA CTTTGCGCTC GTTCATATTG AAAAATTAGA GGGCATTGGC TCTGACCATT ACCCTTTATA CACGGAGCTC GCGTTTATTG AACAGTAA
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Protein sequence | MDIALIIASL LFIIVSFTPL LPSSHWLVRV WEFPRLQISV IIGFLLICHV VNWPSTNIPF FVNALAVGGL TISLVYQIIW IIPYTPFYKR EVTRIKNAKP QDTLSVLSSN VYMPNNDFRK LIEHVRNKQP DFLVTLESNE KWQKGISEIE SEYPYRKFCA LENLYGMHLY SKIPFEEATL NFLIEDDVPS MKVKIKHKGK DALLYFLHPK PPSPTENTYA KPRDIELTVV GEEIAKTEGP IIVAGDLNDV AWSPTTRKFK KISGLLDPRE GRGFYNTFHA KYPLVKWPLD HVFHSRHFAL VHIEKLEGIG SDHYPLYTEL AFIEQ
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