Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01216 |
Symbol | |
ID | 6778088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 1302490 |
End bp | 1303161 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642754653 |
Product | putative oxidoreductase |
Protein accession | YP_002125524 |
Protein GI | 196156035 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.711869 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTTG CGGAATTTGC AGCATCGAGA AAAAGTGTAC GAGGGTTCAC AAAACAGCCC GTTACAAAAG AAACGGTAGA CGCAATTATC AACGCCGCAA AGTGGGCGCC GTCATCTTAC AACACACAAA CATGGAAAAT TCATGCGGTA ACTGGCGATG TCCTCGATAG AATTCGCGAA GGCAACACCA AAAATACGCT TGAAGGTAAG CCGCACGTTC GTGACTTTCC TTATAAGGAA GACTACGAAG GTATTCATCG TCAGCGCCAA ATTGATGTGG CTATTCAATT GTTCGACGTG ATGGGAATAT CGCGTGAAGA CAAAGAAAAG CGTATGGATT GGATGATGCG AGGCTTCAGG CAGTTTGATG CACCCGTTTC GCTGGTTCTC ACATATGATA GGTCTCTAGA GCCCGCTGGA ATAACCCAAT TTGGCCTAGG GTCACTAGCG TATGGCATTG TTCTAGCAGC GTGGGATTTA GGGTTAGGTT GTGTGATAAA CGGTCAGGGT ATCATGCAGT CTGAAGTGGT ACACCAGTGC GCTAACATTC CAGATGATGA AGCCATTATG ATTTGTATTG CTTTAGGCTA TCCCGACCCT GATTTTCCTG CTAATGACGT GCGCTCTACC CGCGCCGATA ACGAAGAGTT TGTAACTTAT CATGGCTTTT AA
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Protein sequence | MNFAEFAASR KSVRGFTKQP VTKETVDAII NAAKWAPSSY NTQTWKIHAV TGDVLDRIRE GNTKNTLEGK PHVRDFPYKE DYEGIHRQRQ IDVAIQLFDV MGISREDKEK RMDWMMRGFR QFDAPVSLVL TYDRSLEPAG ITQFGLGSLA YGIVLAAWDL GLGCVINGQG IMQSEVVHQC ANIPDDEAIM ICIALGYPDP DFPANDVRST RADNEEFVTY HGF
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