Gene MADE_01212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01212 
Symbol 
ID6775216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand- 
Start bp1297843 
End bp1298853 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content43% 
IMG OID642754649 
Productsite-specific recombinase, resolvase family protein 
Protein accessionYP_002125520 
Protein GI196156031 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCACCC GCGCGATAAC GCTGCGAACT CTACGCGCAC CTCCCAAAGT CAATACTGGC 
AAGGGCTCAA GAATTTCACT TCCATTAACC TTTAAGTATT TTGGAGTGAA CGAAGTGGCA 
ACTATCCGTC AATTAAAATC AGGCAACTGG AACGTACAGA TTCGTGAGCA AGGTAAGCGA 
ATCTCTAAGA CTTTTCCAAC TCAACAAGAA GCAGAACGTT TCGCCTTAAT GGGCTCAAAT 
GAATTGTCTT TTCACGAGGT CTGCGACAAA TATCTTGAGC ACATGGGCGA TTCTGTGCGT 
TACCGTGTGC GATGCTTGAA GAAAAACTTT AAGTCGCCTC CTACCCTAGC AGAAATCGAA 
GCATTTAAGC GTCAGAGACT CAAAGAAGTA AAGAGCAGTA CCGCGAGATT AGACTTACAG 
ATGCTGTCTC GCATCGTTAA GTTTGGCATT AAACACTTCG AGTTAGATTG GCCATTTCCT 
TTCAACGACT TCAAATATCC TCCTGAATGC CAACCACGAG ACAGAGTAGT AACACAGAAA 
GAGTTAAAGC TATTGCTTGA AGATTTACCT CCATTAGTTG CATCTGCTGC TGAACTCTCT 
TACGAGACTG CTATGCGTAG AGGAGAAATT GTAAAGATAC AAAAGCAACA TATAGAGTTT 
CACCAAAACA GACTTTATGT TCCTGAAGCC AAGAATGGCT ATTCACGCTA CGTTCCGTTA 
AACGCAAAGG CAACTCAGAT TTTAAAAGAC AGGCTTGTGT CATGTAATAA TCATCAAATC 
CTCTACAACG TTACAGCAGA AAGTCTCTCG AAGGCTTTTA GACGAGCATG TAAACGCCTA 
GAAATAACCG GACTATCGTT TCATTCAATG AGGCATTCAG CTATCACTAA GTACGCTCAA 
AGAGGCCTTT CGGTTAACCA ATTAAAAGTT ATTTCAGGGC ACCGTTCAAC TGAGATGCTG 
GAGCGATACA CACACCTTGG GGTTAAGGAC GTGGTTTCTC TGATGGACTG A
 
Protein sequence
MPTRAITLRT LRAPPKVNTG KGSRISLPLT FKYFGVNEVA TIRQLKSGNW NVQIREQGKR 
ISKTFPTQQE AERFALMGSN ELSFHEVCDK YLEHMGDSVR YRVRCLKKNF KSPPTLAEIE 
AFKRQRLKEV KSSTARLDLQ MLSRIVKFGI KHFELDWPFP FNDFKYPPEC QPRDRVVTQK 
ELKLLLEDLP PLVASAAELS YETAMRRGEI VKIQKQHIEF HQNRLYVPEA KNGYSRYVPL 
NAKATQILKD RLVSCNNHQI LYNVTAESLS KAFRRACKRL EITGLSFHSM RHSAITKYAQ 
RGLSVNQLKV ISGHRSTEML ERYTHLGVKD VVSLMD