| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01195 |
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| Symbol | |
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| ID | 6777980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 1276499 |
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| End bp | 1278178 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 642754632 |
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| Product | penicillin-binding protein |
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| Protein accession | YP_002125503 |
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| Protein GI | 196156014 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.119719 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATTGGTT TAAGCGCCTG CCAACCATCT TCAAAACCTG AAAAGCCTCT TAATGGCCCT
TCACAACAAA CACTCGAGTT TGACCGGCTA TTTACCCAAT TCGATGATAT TAATAAGCCA
GGGGCCTCAG TTGCAGTAAT GCAGGATGGA GAGATTATAT TTTCAAAAGG TTATGGCAGC
GCAAACCTAG AATACGATAT ACCTGTTACG CCAGAAACTA TGTTTCACGT TGCATCTGTA
TCGAAGCAAT TTACCGTATT CGCCATTCTT CTACTTGCTG AAGAAGGTAA GTTAAATTTC
GATGATGACA TACGACAATA CATTCCAGAA GTACCGGATT TTGGTCACAC TATAACCTTA
CGACACTTAG CATCACATAC AAGCGGCATG CGTGATCAAT GGAATTTGTT GCGTATGGCT
GGTTGGCGAT TAGATGACGT AATCACTACC GAACACGTAC TAAAAATGGT AGCAAAACAG
AAAGAGCTAA ACTTCAAACC GGGAGAAGAG TTTCTGTACT CAAATACCGG GTTCACACTA
TTAGCAGAGG TTGTTGCACG TGTTAGTGGT AAATCTTTTG CTCAATTCAC ACAGGAAAGG
CTGTTCACGC CATTGAATAT GAGTAACAGC TTGTTTTACG ACGACCATCA AAAGATCGTT
AGCAATAGGG CCTACTCATA CGAACGCAGC GGCAATGGTT ACAAAAAAAG TGTGCTGAAC
TTTTCAAATG TAGGTGCAAC AAGTTTGTTT ACGACAGCAG AAGATCTGCT GAAATGGTCG
GCTAATTTCA CCGAACCGAC TGTGGGTAGC CCTGCCGTAA TCGAGCAAAT GAATACCCTT
GCGTCCTTAA ACAACGGAGA AACATTTGGT GGTGCATATG GGCAATTTAT TAGCTACTAC
AAAGGTACCA AATATATTCA GCATAGCGGC GGAGACGCAG GATTTCGTTC GTATTTGGCT
CGATTTCCTA AACAAAATTT AGCAATAGCA ATATTGAATA ATGGCGCAGA TGCAAGACCT
TGGGAATTGG CTCTGCAAAT TGCTGACAGG CTTATAAAGA AAAACAACCC TCCCCCTCAG
AACGCGATTG CTGACGCATT TCTGGAGTCA ATCTCACCTA AACAAATATC TGATTCTCTT
GAGTTAAGTG AAGACATACT AAATGCCTTT GTGGGTCACT ATTGGTATGA ACCAGAAACG
TACTCACGAG AGATATATTT AGAAAACGGT AAATTAATGT ATTCAAGGGG CCAAGACGAC
GTAAGCGCCC TCGCTCCTAT CAGCAAAAAC ACATTCAAGA TGCTGAATGT AGAGGGAGAG
ATTTATGTTA AATTTACTAA AAATGACGAG AAAAGCTTAA TGACAGTGAA AGTAGACAAT
GTCGATACGT ATGTGTCGGT TGCCTATACA CCAGTCAAAA TAACCAAAAC CTGGTTATCG
CAATTCGCCG GCAGTTACTT CAGCCCTGAA CTTTCTTCCA CTTATCACTT TTCACCAGAA
AATAAACAGC TGAAAATTTC TCATCACCGT CTAAGCGACC ATTATATTGC GCCAGTCAAA
GATGACTTTT TTAGCTCACA AATTGGCGAT ATCCTATTTG AGCGTGATGT TCACGGCAAG
GTGAATGGCT TTAGGATATC TAACGGTCGT GTTCGCAATC TTTACTTTAG AAAGCTATAG
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| Protein sequence | MIGLSACQPS SKPEKPLNGP SQQTLEFDRL FTQFDDINKP GASVAVMQDG EIIFSKGYGS
ANLEYDIPVT PETMFHVASV SKQFTVFAIL LLAEEGKLNF DDDIRQYIPE VPDFGHTITL
RHLASHTSGM RDQWNLLRMA GWRLDDVITT EHVLKMVAKQ KELNFKPGEE FLYSNTGFTL
LAEVVARVSG KSFAQFTQER LFTPLNMSNS LFYDDHQKIV SNRAYSYERS GNGYKKSVLN
FSNVGATSLF TTAEDLLKWS ANFTEPTVGS PAVIEQMNTL ASLNNGETFG GAYGQFISYY
KGTKYIQHSG GDAGFRSYLA RFPKQNLAIA ILNNGADARP WELALQIADR LIKKNNPPPQ
NAIADAFLES ISPKQISDSL ELSEDILNAF VGHYWYEPET YSREIYLENG KLMYSRGQDD
VSALAPISKN TFKMLNVEGE IYVKFTKNDE KSLMTVKVDN VDTYVSVAYT PVKITKTWLS
QFAGSYFSPE LSSTYHFSPE NKQLKISHHR LSDHYIAPVK DDFFSSQIGD ILFERDVHGK
VNGFRISNGR VRNLYFRKL
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