| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01191 |
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| Symbol | |
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| ID | 6777900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 1269582 |
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| End bp | 1271807 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642754628 |
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| Product | fused 5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase and FAD-dependent demodification enzyme |
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| Protein accession | YP_002125499 |
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| Protein GI | 196156010 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4121] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCTA AGCATGCACA GGTTCATTTT AATGAGAGCG GTACGCCTGT CGCCGACCAT
TTTGACGACG TTTATTTTTC TAACGACAGC GGTATAGATG AAACCCAACA CGTTTTTGTA
GCAGGCAACG ACCTTCTTGA ACGCTGGCAA CAGTGGCGCA ACCCTACTTT TGTCATCGCT
GAAACAGGTT TCGGAACTGG GCTGAATTTC TTAGTTGCCA TGCGTGCTTT TAATGAATTT
AAAGCAACGA ACCCGAATCA TCCGCTTAAG CACCTTTACT TTATTACCAC AGAAAAGTTT
CCACTGCCTC AACAGGATAT GCAACGTGCA CTAGAAGCTT TTCCTGCCCT TAAAGCAGAA
GCGGAAGCGC TAGCTGAGCT TTACCCCATG GGGCTCGAGG GCTGTCACCG CTTGTATTTC
GAACGCCACT CAACAACGCT CGACCTGTGG ATTGGTGATG TTCATGAACT CTTACCCCAG
TGGCACGCAC CTATAGAAGG GTTGATTGAT GCTTGGTTTT TAGATGGTTT CGCACCTAGC
AAAAACCCTG ACATGTGGAC CGATGCTCTG TTTAGCCAAA TGGCTCGCTT GTCAAAAACC
GGCACAACCT TTGGCACATT TACCGCTGCG GGCATCGTAA AGCGTGGGCT TGCTGGCGTA
GGATTTGACA TCAAAAAGCG TAAGGGGTTT GGCCGTAAGC GCGACATGCT GACCGGCGTT
TTTAACACCG CTAACGACAG TGTACAACAT AAGCTTCGCC TGCCAAATGG TCCATACTAC
CGCTACGTTA ATAGTGCAGT TACCGAGGCG AGCAAAGTTG CAGTGGTTGG TTCAGGCCTT
GCGGCAGCCA CGGCGTGCCT TGCGTTAGTG AAGCGCGGCA TTAACACCAC GCTATATTTT
GATGGTGACA CCCTTGCAAG TGGTGCGTCT GGCAACCCGC AAGGTGGGTT TTACCCCCAG
CTTCACAGTG AAGCAAGCAT TGCTAGCCGC ATTCAGGCAC ACAGTTTTTT ATATGCGCGC
CAAGCCTACG ACCATATTAT TAAACATGTA AAAAACAATG GTCTAGCCGA CGTTGCCCAT
GATTTCTGTG GCGTAATTCA ACTAAGCTTT AACGACAAAG TAGCAGAGCG CCAAAATAAA
CTTGCGACAG CCGATGTATG GCCTGAAGCT TTGATTAAGC CCGTGGACAG TAAAGAAGTG
AGCGATATCG CTAACCTAGC CCTTCCTTAC TCTGGCTTGT ACATTGGCTT GGGCGGATGG
CTTTCTCCTC CACAGCTAGT TAATGCCATG ATTGAAGAAG CACTTCAAAG CGGCAAACTC
ACGCTGAAAC TCAATCACAC CTATGTATCG CATAAAGTGA TTGAGGGAAC GCCACACAAT
CAAGAAGGTG GCGCTTTACC CGGCGTTCTT GATGCGGATG ATGTGGAAAT AGCTTCAGGC
GAGGCCGTTA ACGGGGCAGT AAGACAGCAA GTACAAATTC GTTTTAATGT TAGTGAGCCT
GAAAAATGTG GTGGAAATGA AACGGCGTGC GCTACTGCCA ATGCCGGTTT ACCCCAAGAG
AAGCCGGCAC TCAGCGGTAA TGAAAAAAAC GTTATTGCCG ATCACCTTAT CCTTGCGTTG
GGCGCAGGGG CAATAAATTC AGAAGATTTT AACAGTCTCT CTCTTCGCCC TGTTCGCGGC
CAAGTAGAAG CCATTCCTAC GCAACCTCCT ATCGACGGTC TTAATACGGT TTTATGTCAC
AAGGGCTATA TGACTCCGGC ATTAGAGGGT AGGCATGCGC TAGGTTCAAC CTACGTGAAA
AACGACTTAA CTACGGAGGT TCGAAACGAA GAAACTGAAA CGAACCTTGC CACACATGAA
CAGGCACTGG CAAACACCAG CATAGTTCAG GCATTACAAC ACGACGGCAA AGCAAGGGCG
GCTACGCGTT TGGGCTCGCC TGACCATCAG CCTGTGGTTG GTGCTCTGCA TAACTTTGAC
GTGATCAAAA GCCAGTTCGC CATGTTAAGC GTAGGTAAAC CACTGACAAG CGCGCCGTTG
CTGCCTAACA GCGTGGTCAG TACCCTAACC TGTTTAGGCT CACGTGGTTT AACTACGGCG
CCATTGATGG CTGAGGTACT AGTAAGCAGT TTATGCAAGG AGCCATTGCC ACTAAGCAAT
GACCTTCTCA ATGCGGTGAA CACAAGCCGC TTTATGACAA GAGAGATGAT AAGAAGCCAG
AGCTAG
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| Protein sequence | MKSKHAQVHF NESGTPVADH FDDVYFSNDS GIDETQHVFV AGNDLLERWQ QWRNPTFVIA
ETGFGTGLNF LVAMRAFNEF KATNPNHPLK HLYFITTEKF PLPQQDMQRA LEAFPALKAE
AEALAELYPM GLEGCHRLYF ERHSTTLDLW IGDVHELLPQ WHAPIEGLID AWFLDGFAPS
KNPDMWTDAL FSQMARLSKT GTTFGTFTAA GIVKRGLAGV GFDIKKRKGF GRKRDMLTGV
FNTANDSVQH KLRLPNGPYY RYVNSAVTEA SKVAVVGSGL AAATACLALV KRGINTTLYF
DGDTLASGAS GNPQGGFYPQ LHSEASIASR IQAHSFLYAR QAYDHIIKHV KNNGLADVAH
DFCGVIQLSF NDKVAERQNK LATADVWPEA LIKPVDSKEV SDIANLALPY SGLYIGLGGW
LSPPQLVNAM IEEALQSGKL TLKLNHTYVS HKVIEGTPHN QEGGALPGVL DADDVEIASG
EAVNGAVRQQ VQIRFNVSEP EKCGGNETAC ATANAGLPQE KPALSGNEKN VIADHLILAL
GAGAINSEDF NSLSLRPVRG QVEAIPTQPP IDGLNTVLCH KGYMTPALEG RHALGSTYVK
NDLTTEVRNE ETETNLATHE QALANTSIVQ ALQHDGKARA ATRLGSPDHQ PVVGALHNFD
VIKSQFAMLS VGKPLTSAPL LPNSVVSTLT CLGSRGLTTA PLMAEVLVSS LCKEPLPLSN
DLLNAVNTSR FMTREMIRSQ S
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