| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01182 |
|---|
| Symbol | |
|---|
| ID | 6776037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 1263053 |
|---|
| End bp | 1264090 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 642754619 |
|---|
| Product | ISCps1, transposase |
|---|
| Protein accession | YP_002125490 |
|---|
| Protein GI | 196156001 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3547] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACAATA TAATCACAGG TGTTGATTTA GCGAAAGAAG AAATTCAGGT TTGCGTTTGT
AAACGCAACA AGGTGCAGTC TAATCAGGCG ATGACACCGA TAGAATTTGG TTCTTGGCTA
GCGTCGTCAA AACCAATGAC AATTGTTTTT GAAGCATGTA GTACATCAAA CTACTGGAAG
CAAAAAGCGT TGGAATATGG GCATGATGCT CGATTAATTT CAGCAAAATT GGTTGCTAGT
GTTAGGCAAA ATCAGAAAAC AGATAAAAAC GACGCCTTAG CGGTTGCGCA AGCTGCTCAA
CTCACCGATG TTTCGTTTAT TAACGGCAAA TCAAAAGAGC AGCAAGAGCT ACAAACCTTG
GTTCGTCTGC GAGAGTTGGC CGTTAAGCAT AAAGTCGCAA TGCAGCAACA AATTAAATCT
TTATTGCTAG AGTTTAATAT CCGAATCTCG CCTAGTCAGG GAGGGTTAAG TGGCGTTGTT
GAAGGCGTAC TGGAAGATGC TGAAAATGGC TTTTCCATGG TTTTTAGGCA AGCTCTCAGT
ACTAGCTGGC AACAACTCCA GCGTGGTATT GAGTCGATAA AGCAGTACGA TTTATATTTA
GAAAAAGCAG CAAACGGCCA CGAAATATGT AAATCGCTAC AGGCCCTAGA AGGTGTAGGT
CCGTTAAACG CTGTGAATCT TTATATGGCA CTGGGCTGTG GAGAGATGGG GCAATTTGAA
AAAGGTCGCG ATGCATCTGC CTGTATTGGT TTAACGCCTA TTCAACATTC GTCGGGCGGT
AAAGTAAAAT TGGGCTCGGT GGGCAAGTAC GTTAAAAATA ATATGCTACG AAGTTGCTTA
GTTAGCGGTG CAATGTCAGC AGTTAATCAG GCGATGAGAC GACCAGCAAA AACCAAAAAA
GAGATGTGGA TCCAGCAGAT GGTTGAACGC AGAGGTAAGC GCTGTACAGC GGTCGCGCTA
GCAAATAAAA CAGTAAGAAC GGCATTCGCG ATGCTTACAA ATGGCACAGA ATACAAAGCA
GAACTACTCG CTGCTTAA
|
|---|
| Protein sequence | MHNIITGVDL AKEEIQVCVC KRNKVQSNQA MTPIEFGSWL ASSKPMTIVF EACSTSNYWK
QKALEYGHDA RLISAKLVAS VRQNQKTDKN DALAVAQAAQ LTDVSFINGK SKEQQELQTL
VRLRELAVKH KVAMQQQIKS LLLEFNIRIS PSQGGLSGVV EGVLEDAENG FSMVFRQALS
TSWQQLQRGI ESIKQYDLYL EKAANGHEIC KSLQALEGVG PLNAVNLYMA LGCGEMGQFE
KGRDASACIG LTPIQHSSGG KVKLGSVGKY VKNNMLRSCL VSGAMSAVNQ AMRRPAKTKK
EMWIQQMVER RGKRCTAVAL ANKTVRTAFA MLTNGTEYKA ELLAA
|
|---|
| |