| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01177 |
|---|
| Symbol | |
|---|
| ID | 6775932 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 1258020 |
|---|
| End bp | 1259513 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 642754614 |
|---|
| Product | putative anion transport protein (ABC superfamily, ATP-binding protein) |
|---|
| Protein accession | YP_002125485 |
|---|
| Protein GI | 196155996 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[V] Defense mechanisms |
|---|
| COG ID | [COG1119] ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA
[COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.912331 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTATC TTTCTGAATT TCAAACAAAG CTTTCTAATC AATATATTAC CCCTGCATTT
TCGTTAGCAC TAAATAATGA AAAACCACCC TCGCACTACC TTATTGCAGG TAGAAATAGT
AGCGGGAAGT CGCTTCTAAT TTCTGCGCTT GCGGGTAACG GTAAAGTAGA AAGCGGTGTT
CGCGAGTGTA GTTCGGTTGT TGCAGAAGTA TCGGTTTTTA GGCAGCAGAC GTTAATTGAA
GAAGAAAAGC AAAAAGACAG TGCGGATATT TTAGATGTAA TCGCTGAGCC AACAAAAGTT
CGAGAGTTAT TCTTACGCAC GAATGAGGAT TATCAAAATC ACCTTTATTA CAACGAGCTA
ACCTCCGCTC TTAGAATTGA GCATTTGCTA GATAATGCGT TTCTTTCACT GTCGACGGGA
GAAACTCGCA AGGTAATTAT CATGCTGGCG TGGTTGAACG ATGCCGCAAT TATTTTGCTT
GATGAACCTT TTGAAGGCTT AGATGTTGAA GCGATTGATG CATTTAGTCG CTTTCTTGTT
TCTCAACAGC AAGCCACACT GGCGTTGACC GCCAACAAGC TTGCAGACAT TCCTGAGGGC
CTTCATGCAC AACTCATTGT TATGGATGAT CTAGCTATTA CGTGGAAATC TGACGGCACA
CTCAACTATG ATGACTTGCG CTCAGAGTTA AGCACTTGGT TTGCGCTGGA GTCTGATGAT
ATCGATGTAC CCGCAGCGCT TAGCGCTAGT GATCAAAACC GCAGCGACCC AAACCGCAAG
GACCAAAATC ACAATAAGCA GAACAGTGAG CTTGATGCAC TACCCCATAC ATTGATCCAG
CTAAATGACG GCTTTATGCG TTTCGATGAA CGTACTGTAT TTGAAAAGCT TAACTTTACG
CTTAATAAAA ATGACCATTG GCAGATAACG GGCCCGAACG GGTCAGGTAA AACCTGTTTG
CTTCAAATGT TTACTGGTGA TAATTCCCAT TGTTATACCA ATGACTTAAC AATGTTTGGC
ATAAAACGGG GAACTGGCGA AAGCATATGG GATATTAAGA AGCACATTGG CATTATGTCG
AATTCGCTGC ACATGCAATA CAAAGTAAAC GCAAGTGTTG AACATGTAAT CATATCAGGC
TTTCACGACA GCATTGGTCT ATACACCCGC CCAACGTTGG CTGAGCGAAA CGTAGCAGGA
CAATGGCTTG CTGTTCTGGG TTTACAACAG AAGAAGAACA CACCGTTTCA GTCGCTATCG
TTTGGCGATC AGCGATTAGT ACTAATTGCA CGTTCTATGG TTAAGCACCC CGCCGTGCTT
ATTTTAGATG AACCCTGCAA TGGCTTAGAC GACTTTAACC GCCAAAAAGC GCTTAAGCTT
ATTGATAAAT TGGCTAAGGC TGGCACCAGT ACTCTCTTGT ATGTTAATCA CAATCCAGAA
GAGTGCATTC CCAGCATTCG CAACACGTTA AATATGAAAG ACTATAATGT TTGA
|
|---|
| Protein sequence | MLYLSEFQTK LSNQYITPAF SLALNNEKPP SHYLIAGRNS SGKSLLISAL AGNGKVESGV
RECSSVVAEV SVFRQQTLIE EEKQKDSADI LDVIAEPTKV RELFLRTNED YQNHLYYNEL
TSALRIEHLL DNAFLSLSTG ETRKVIIMLA WLNDAAIILL DEPFEGLDVE AIDAFSRFLV
SQQQATLALT ANKLADIPEG LHAQLIVMDD LAITWKSDGT LNYDDLRSEL STWFALESDD
IDVPAALSAS DQNRSDPNRK DQNHNKQNSE LDALPHTLIQ LNDGFMRFDE RTVFEKLNFT
LNKNDHWQIT GPNGSGKTCL LQMFTGDNSH CYTNDLTMFG IKRGTGESIW DIKKHIGIMS
NSLHMQYKVN ASVEHVIISG FHDSIGLYTR PTLAERNVAG QWLAVLGLQQ KKNTPFQSLS
FGDQRLVLIA RSMVKHPAVL ILDEPCNGLD DFNRQKALKL IDKLAKAGTS TLLYVNHNPE
ECIPSIRNTL NMKDYNV
|
|---|
| |